Atomic Resolution Structure of the Oncolytic Parvovirus LuIII by Electron Microscopy and 3D Image Reconstruction

Viruses. 2017 Oct 30;9(11):321. doi: 10.3390/v9110321.

Abstract

LuIII, a protoparvovirus pathogenic to rodents, replicates in human mitotic cells, making it applicable for use to kill cancer cells. This virus group includes H-1 parvovirus (H-1PV) and minute virus of mice (MVM). However, LuIII displays enhanced oncolysis compared to H-1PV and MVM, a phenotype mapped to the major capsid viral protein 2 (VP2). This suggests that within LuIII VP2 are determinants for improved tumor lysis. To investigate this, the structure of the LuIII virus-like-particle was determined using single particle cryo-electron microscopy and image reconstruction to 3.17 Å resolution, and compared to the H-1PV and MVM structures. The LuIII VP2 structure, ordered from residue 37 to 587 (C-terminal), had the conserved VP topology and capsid morphology previously reported for other protoparvoviruses. This includes a core β-barrel and α-helix A, a depression at the icosahedral 2-fold and surrounding the 5-fold axes, and a single protrusion at the 3-fold axes. Comparative analysis identified surface loop differences among LuIII, H-1PV, and MVM at or close to the capsid 2- and 5-fold symmetry axes, and the shoulder of the 3-fold protrusions. The 2-fold differences cluster near the previously identified MVM sialic acid receptor binding pocket, and revealed potential determinants of protoparvovirus tumor tropism.

Keywords: Parvoviridae; cryo-electron microscopy; oncolytic virotherapy; structural virology.

MeSH terms

  • Animals
  • Capsid / chemistry
  • Capsid / ultrastructure
  • Capsid Proteins / chemistry
  • Cryoelectron Microscopy / methods
  • H-1 parvovirus / chemistry
  • H-1 parvovirus / ultrastructure
  • Humans
  • Image Processing, Computer-Assisted
  • Imaging, Three-Dimensional
  • Mice
  • Minute Virus of Mice / chemistry
  • Minute Virus of Mice / ultrastructure
  • Models, Molecular
  • Oncolytic Viruses / chemistry*
  • Oncolytic Viruses / ultrastructure*
  • Parvovirus / chemistry*
  • Parvovirus / ultrastructure*

Substances

  • Capsid Proteins