Structural analysis of SgvP involved in carbon-sulfur bond formation during griseoviridin biosynthesis

FEBS Lett. 2017 May;591(9):1295-1304. doi: 10.1002/1873-3468.12643. Epub 2017 Apr 21.

Abstract

Griseoviridin (GV) is a broad-spectrum antibiotic with antibacterial and antifungal activity. In the GV biosynthetic pathway, SgvP catalyzes formation of the carbon-sulfur bond in GV. Herein, we report the recombinant expression and characterization of SgvP from Streptomyces griseoviridis NRRL2427. We also present the 2.6 Å crystal structure of SgvP, which is the first structure of a cytochrome P450 involved in carbon-sulfur bond formation in GV. Structural analysis indicates that Pro237 in the I-helix of SgvP may play a critical role in dioxygen binding and proton transfer during the catalytic cycle. Of the three channels we observed in SgvP, channel 3 may be essential for substrate ingress and egress from the active site, while channels 1 and 2 may be the solvent and water pathway, respectively.

Database: Coordinate and structure factor were deposited in the Protein Data Bank database under the accession number 4MM0.

Keywords: carbon-sulfur bond; crystal structure; griseoviridin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Biocatalysis
  • Carbon / chemistry*
  • Carbon / metabolism
  • Catalytic Domain
  • Crystallography, X-Ray
  • Cytochrome P-450 Enzyme System / chemistry
  • Cytochrome P-450 Enzyme System / metabolism
  • Models, Molecular
  • Molecular Structure
  • Oxygen / chemistry
  • Oxygen / metabolism
  • Peptides / chemistry*
  • Peptides / metabolism
  • Proline / chemistry
  • Proline / metabolism
  • Protein Conformation
  • Sequence Homology, Amino Acid
  • Spectrophotometry
  • Streptomyces / genetics
  • Streptomyces / metabolism
  • Substrate Specificity
  • Sulfur / chemistry*
  • Sulfur / metabolism

Substances

  • Bacterial Proteins
  • Peptides
  • griseoviridin
  • Sulfur
  • Carbon
  • Cytochrome P-450 Enzyme System
  • Proline
  • Oxygen