Structure of a C-terminal fragment of its Vps53 subunit suggests similarity of Golgi-associated retrograde protein (GARP) complex to a family of tethering complexes

Proc Natl Acad Sci U S A. 2010 Aug 10;107(32):14176-81. doi: 10.1073/pnas.1009419107. Epub 2010 Jul 26.

Abstract

The Golgi-associated retrograde protein (GARP) complex is a membrane-tethering complex that functions in traffic from endosomes to the trans-Golgi network. Here we present the structure of a C-terminal fragment of the Vps53 subunit, important for binding endosome-derived vesicles, at a resolution of 2.9 A. We show that the C terminus consists of two alpha-helical bundles arranged in tandem, and we identify a highly conserved surface patch, which may play a role in vesicle recognition. Mutations of the surface result in defects in membrane traffic. The fold of the Vps53 C terminus is strongly reminiscent of proteins that belong to three other tethering complexes--Dsl1, conserved oligomeric Golgi, and the exocyst--thought to share a common evolutionary origin. Thus, the structure of the Vps53 C terminus suggests that GARP belongs to this family of complexes.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Carrier Proteins / chemistry*
  • Crystallography, X-Ray
  • Endosomes / metabolism
  • Multiprotein Complexes / chemistry*
  • Peptide Fragments / chemistry*
  • Protein Conformation
  • Protein Subunits
  • Protein Transport
  • Saccharomyces cerevisiae Proteins / chemistry*
  • trans-Golgi Network / metabolism*

Substances

  • Carrier Proteins
  • Multiprotein Complexes
  • Peptide Fragments
  • Protein Subunits
  • Saccharomyces cerevisiae Proteins
  • VPS53 protein, S cerevisiae

Associated data

  • PDB/3NS4