Analysis of serine-threonine kinase specificity using arrayed positional scanning peptide libraries

Curr Protoc Mol Biol. 2010 Jul:Chapter 18:Unit 18.14. doi: 10.1002/0471142727.mb1814s91.

Abstract

Protein kinases vary substantially in their consensus phosphorylation motifs, the residues that are either preferred or deselected by the kinase at specific positions surrounding the phosphorylation site. The protocol described here is used to rapidly determine phosphorylation motifs for serine-threonine kinases. The procedure involves screening an arrayed combinatorial peptide library consisting of 198 biotinylated substrates. Peptides are phosphorylated by the kinase of interest in the presence of radiolabeled ATP and then captured on streptavidin membrane. The membrane is subsequently washed, dried, and exposed to a phosphor screen to visualize and quantify incorporation of radiolabel into the peptides. The phosphorylation motif is thereby derived from the relative extent of phosphorylation of each peptide in the array.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Peptide Library
  • Phosphorus Radioisotopes / metabolism
  • Protein Serine-Threonine Kinases / metabolism*
  • Staining and Labeling
  • Substrate Specificity

Substances

  • Peptide Library
  • Phosphorus Radioisotopes
  • Protein Serine-Threonine Kinases