Misacylation of pyrrolysine tRNA in vitro and in vivo

FEBS Lett. 2008 Oct 15;582(23-24):3353-8. doi: 10.1016/j.febslet.2008.08.027. Epub 2008 Sep 5.

Abstract

Methanosarcina barkeri inserts pyrrolysine (Pyl) at an in-frame UAG codon in its monomethylamine methyltransferase gene. Pyrrolysyl-tRNA synthetase acylates Pyl onto tRNAPyl, the amber suppressor pyrrolysine Pyl tRNA. Here we show that M. barkeri Fusaro tRNAPyl can be misacylated with serine by the M. barkeri bacterial-type seryl-tRNA synthetase in vitro and in vivo in Escherichia coli. Compared to the M. barkeri Fusaro tRNA, the M. barkeri MS tRNAPyl contains two base changes; a G3:U70 pair, the known identity element for E. coli alanyl-tRNA synthetase (AlaRS). While M. barkeri MS tRNAPyl cannot be alanylated by E. coli AlaRS, mutation of the MS tRNAPyl A4:U69 pair into C4:G69 allows aminoacylation by E. coli AlaRS both in vitro and in vivo.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alanine / chemistry
  • Alanine / metabolism
  • Alanine-tRNA Ligase / chemistry
  • Alanine-tRNA Ligase / metabolism
  • Archaeal Proteins / genetics
  • Archaeal Proteins / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Lysine / analogs & derivatives*
  • Lysine / chemistry
  • Lysine / metabolism
  • Methanosarcina barkeri / enzymology
  • Methanosarcina barkeri / genetics
  • Methanosarcina barkeri / metabolism*
  • Methyltransferases / genetics
  • Methyltransferases / metabolism
  • Mutation
  • RNA, Archaeal / chemistry
  • RNA, Archaeal / metabolism*
  • RNA, Transfer, Lys / chemistry
  • RNA, Transfer, Lys / metabolism*
  • Serine / chemistry
  • Serine / metabolism
  • Serine-tRNA Ligase / chemistry
  • Serine-tRNA Ligase / metabolism
  • Transfer RNA Aminoacylation*

Substances

  • Archaeal Proteins
  • RNA, Archaeal
  • RNA, Transfer, Lys
  • Serine
  • Methyltransferases
  • monomethylamine methyltransferase
  • Serine-tRNA Ligase
  • Alanine-tRNA Ligase
  • pyrrolysine
  • Lysine
  • Alanine