Expression profiling of MAP kinase-mediated meiotic progression in Caenorhabditis elegans

PLoS Genet. 2006 Nov 10;2(11):e174. doi: 10.1371/journal.pgen.0020174.

Abstract

The LET-60 (Ras)/LIN-45 (Raf)/MPK-1 (MAP kinase) signaling pathway plays a key role in the development of multiple tissues in Caenorhabditis elegans. For the most part, the identities of the downstream genes that act as the ultimate effectors of MPK-1 signaling have remained elusive. A unique allele of mpk-1, ga111, displays a reversible, temperature-sensitive, tissue-specific defect in progression through meiotic prophase I. We performed gene expression profiling on mpk-1(ga111) animals to identify candidate downstream effectors of MPK-1 signaling in the germ line. This analysis delineated a cohort of genes whose expression requires MPK-1 signaling in germ cells in the pachytene stage of meiosis I. RNA in situ hybridization analysis shows that these genes are expressed in the germ line in an MPK-1-dependent manner and have a spatial expression pattern consistent with the location of activated MPK-1. We found that one MPK-1 signaling-responsive gene encoding a C2H2 zinc finger protein plays a role in meiotic chromosome segregation downstream of MPK-1. Additionally, discovery of genes responsive to MPK-1 signaling permitted us to order MPK-1 signaling relative to several events occurring in pachytene, including EFL-1/DPL-1 gene regulation and X chromosome reactivation. This study highlights the utility of applying global gene expression methods to investigate genes downstream of commonly used signaling pathways in vivo.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Caenorhabditis elegans / enzymology*
  • Caenorhabditis elegans / genetics*
  • Caenorhabditis elegans Proteins / metabolism*
  • Chromosome Segregation / genetics
  • Down-Regulation
  • E2F Transcription Factors / metabolism
  • Enzyme Activation
  • Gene Expression Profiling*
  • Gene Expression Regulation, Developmental
  • Genes, X-Linked
  • Germ Cells / metabolism
  • In Situ Hybridization
  • Meiosis / genetics*
  • Mitogen-Activated Protein Kinase 1
  • Mutation / genetics
  • Phenotype
  • Protein Serine-Threonine Kinases / metabolism*
  • Signal Transduction
  • Temperature
  • Transcription Factors / metabolism

Substances

  • Caenorhabditis elegans Proteins
  • E2F Transcription Factors
  • GLD-1 protein, C elegans
  • Transcription Factors
  • dpl-1 protein, C elegans
  • efl-1 protein, C elegans
  • Protein Serine-Threonine Kinases
  • Mitogen-Activated Protein Kinase 1
  • mpk-1 protein, C elegans

Associated data

  • GEO/GSE5069