Genomewide linkage scan for opioid dependence and related traits

Am J Hum Genet. 2006 May;78(5):759-769. doi: 10.1086/503631. Epub 2006 Mar 16.

Abstract

Risk of opioid dependence is genetically influenced. We recruited a sample of 393 small nuclear families (including 250 full-sib and 46 half-sib pairs), each with at least one individual with opioid dependence. Subjects underwent a detailed evaluation of substance dependence-related traits. As planned a priori to reduce heterogeneity, we used cluster analytic methods to identify opioid dependence-related symptom clusters, which were shown to be heritable. We then completed a genomewide linkage scan (with 409 markers) for the opioid-dependence diagnosis and for the two cluster-defined phenotypes represented by >250 families: the heavy-opioid-use cluster and the non-opioid-use cluster. Further exploratory analyses were completed for the other cluster-defined phenotypes. The statistically strongest results were seen with the cluster-defined traits. For the heavy-opioid-use cluster, we observed a LOD score of 3.06 on chromosome 17 (empirical pointwise P = .0002) for European American (EA) and African American (AA) subjects combined, and, for the non-opioid-use cluster, we observed a LOD score of 3.46 elsewhere on chromosome 17 (empirical pointwise P = .00002, uncorrected for multiple traits studied) for EA subjects only. We also identified a possible linkage (LOD score 2.43) of opioid dependence with chromosome 2 markers for the AA subjects. These results are an initial step in identifying genes for opioid dependence on the basis of a genomewide investigation (i.e., a study not conditioned on prior physiological candidate-gene hypotheses).

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Adult
  • Chromosomes, Human, Pair 11 / genetics
  • Chromosomes, Human, Pair 17 / genetics*
  • Chromosomes, Human, Pair 3 / genetics
  • Cluster Analysis
  • Cocaine-Related Disorders / genetics*
  • Female
  • Gene Frequency
  • Genetic Linkage*
  • Genotype
  • Humans
  • Lod Score
  • Male
  • Nuclear Family
  • Opioid-Related Disorders / genetics*
  • Pedigree
  • Phenotype
  • Quantitative Trait Loci*
  • Statistics, Nonparametric