beta-Peptides as inhibitors of protein-protein interactions

Bioorg Med Chem. 2005 Jan 3;13(1):11-6. doi: 10.1016/j.bmc.2004.09.009.

Abstract

We became interested several years ago in exploring whether 14-helical beta-peptide foldamers could bind protein surfaces and inhibit protein-protein interactions, and if so, whether their affinities and specificities would compare favorably with those of natural or miniature proteins. This exploration was complicated initially by the absence of a suitable beta-peptide scaffold, one that possessed a well-defined 14-helical structure in water and tolerated the diverse sequence variation required to generate high-affinity protein surface ligands. In this perspective, we describe our approach to the design of adaptable beta-peptide scaffolds with high levels of 14-helix structure in water, track the subsequent development of 14-helical beta-peptide protein-protein interaction inhibitors, and examine the potential of this strategy for targeting other therapeutically important proteins.

MeSH terms

  • Peptides / chemistry*
  • Protein Binding
  • Proteins / antagonists & inhibitors*
  • Proteins / chemistry

Substances

  • Peptides
  • Proteins