Phylogenetic analysis on the bacteria producing non-volatile fungistatic substances

J Microbiol. 2008 Jun;46(3):250-6. doi: 10.1007/s12275-008-0003-8. Epub 2008 Jul 5.

Abstract

This study characterized the soil bacteria producing non-volatile fungistatic substances. Among the 2,100 colonies of soil bacteria randomly isolated from seven agricultural soil samples, 518 isolates (24.67% of total) showed fungistatic activity toward nematophagous fungi Paecilomyces lilacinus and Trichoderma viride by producing non-volatile substances. A phylogenetic analysis based on amplified ribosomal DNA restriction analysis (ARDRA) and 16S rDNA sequence placed the 518 bacteria in three groups of the domain Bacteria: Actinomycetales, Bacillales, and Gammaproteobacteria. Three genera, Arthrobacter, Bacillus, and Pseudomonas, were the most frequently encountered groups.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antifungal Agents / metabolism
  • Antifungal Agents / pharmacology*
  • Bacteria / classification
  • Bacteria / genetics
  • Bacteria / isolation & purification*
  • Bacteria / metabolism*
  • China
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Molecular Sequence Data
  • Paecilomyces / drug effects*
  • Paecilomyces / growth & development
  • Phylogeny*
  • Plants / microbiology
  • RNA, Ribosomal, 16S / genetics
  • Sequence Homology
  • Soil Microbiology*
  • Trichoderma / drug effects*
  • Trichoderma / growth & development
  • Volatilization

Substances

  • Antifungal Agents
  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S

Associated data

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