Novel Picobirnaviruses in Respiratory and Alimentary Tracts of Cattle and Monkeys with Large Intra- and Inter-Host Diversity

Viruses. 2019 Jun 23;11(6):574. doi: 10.3390/v11060574.

Abstract

Picobirnaviruses (PBVs) are mostly found in animal alimentary samples. In this study, among 576 respiratory specimens from 476 mammals and 100 chickens, genogroup I PBVs were detected in three cattle and three monkeys, and a genogroup II PBV-positive sample was collected from one cattle specimen. More than one PBV sequence type was observed in two and one genogroup I PBV-positive samples from cattle and monkeys, respectively. Twenty-four complete/near-complete segments 2 (nine from respiratory and 15 from alimentary samples) from the cattle and monkey genogroup I PBVs and one complete segment 2 from the cattle genogroup II PBV were sequenced. Similar to other studies, the cattle PBVs also showed a high diversity. In contrast, the monkey PBVs observed in this study were clustered into three distinct clades. Within each clade, all the sequences showed >99% amino acid identities. This unique phenomenon is probably due to the fact that monkeys in our locality reside in separated troops with minimal inter-troop contact.

Keywords: cattle; diversity; monkeys; novel picobirnaviruses; respiratory tracts.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cattle
  • Cattle Diseases / virology*
  • Cluster Analysis
  • Genetic Variation*
  • Genotype
  • Haplorhini
  • Monkey Diseases / virology*
  • Picobirnavirus / classification*
  • Picobirnavirus / genetics
  • Picobirnavirus / isolation & purification*
  • RNA Virus Infections / veterinary*
  • Sequence Analysis, DNA
  • Sequence Homology