Suppression of Epstein-Barr virus DNA load in latently infected nasopharyngeal carcinoma cells by CRISPR/Cas9

Virus Res. 2018 Jan 15:244:296-303. doi: 10.1016/j.virusres.2017.04.019. Epub 2017 Apr 27.

Abstract

Epstein-Barr virus (EBV) infects more than 90% of the world's adult population. Once established, latent infection of nasopharyngeal epithelial cells with EBV is difficult to eradicate and might lead to the development of nasopharyngeal carcinoma (NPC) in a small subset of individuals. In this study we explored the anti-EBV potential of CRISPR/Cas9 targeting of EBV genome in infected NPC cells. We designed gRNAs to target different regions of the EBV genome and transfected them into C666-1 cells. The levels of EBV DNA in transfected cells were decreased by about 50%. The suppressive effect on EBV DNA load lasted for weeks but could not be further enhanced by re-transfection of gRNA. Suppression of EBV by CRISPR/Cas9 did not affect survival of C666-1 cells but sensitized them to chemotherapeutic killing by cisplatin and 5-fluorouracil. Our work provides the proof-of-principle for suppressing EBV DNA load with CRISPR/Cas9 and a potential new strategy to sensitize EBV-infected NPC cells to chemotherapy.

Keywords: CRISPR/Cas9; EBNA1; Epstein-Barr virus; Nasopharyngeal carcinoma.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Agents / pharmacology
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • CRISPR-Associated Protein 9
  • CRISPR-Cas Systems*
  • Cell Line, Tumor
  • Cell Survival / drug effects
  • Cisplatin / pharmacology
  • Clustered Regularly Interspaced Short Palindromic Repeats
  • DNA, Viral / genetics*
  • DNA, Viral / metabolism
  • Endonucleases / genetics*
  • Endonucleases / metabolism
  • Epithelial Cells / drug effects
  • Epithelial Cells / pathology
  • Epithelial Cells / virology
  • Fluorouracil / pharmacology
  • Gene Editing / methods*
  • Genome, Viral*
  • Herpesvirus 4, Human / drug effects
  • Herpesvirus 4, Human / genetics*
  • Herpesvirus 4, Human / growth & development
  • Herpesvirus 4, Human / metabolism
  • Humans
  • Nasopharynx / drug effects
  • Nasopharynx / pathology
  • Nasopharynx / virology
  • Plasmids / chemistry
  • Plasmids / metabolism
  • RNA, Guide, CRISPR-Cas Systems / genetics*
  • RNA, Guide, CRISPR-Cas Systems / metabolism
  • Viral Load / drug effects
  • Virus Latency / genetics
  • Virus Replication

Substances

  • Antineoplastic Agents
  • Bacterial Proteins
  • DNA, Viral
  • RNA, Guide, CRISPR-Cas Systems
  • CRISPR-Associated Protein 9
  • Cas9 endonuclease Streptococcus pyogenes
  • Endonucleases
  • Cisplatin
  • Fluorouracil