Multiple sublineages of influenza A virus (H5N1), Vietnam, 2005-2007

Tien Dung Nguyen; The Vinh Nguyen; Dhanasekaran Vijaykrishna; Robert G Webster; Yi Guan; J S Malik Peiris; Gavin J D Smith

doi:10.3201/eid1404.071343

Multiple sublineages of influenza A virus (H5N1), Vietnam, 2005-2007

Emerg Infect Dis. 2008 Apr;14(4):632-6. doi: 10.3201/eid1404.071343.

Authors

Tien Dung Nguyen¹, The Vinh Nguyen, Dhanasekaran Vijaykrishna, Robert G Webster, Yi Guan, J S Malik Peiris, Gavin J D Smith

Affiliation

¹ National Institute of Veterinary Research, Hanoi, Vietnam. dzungntd@gmail.com

Abstract

Phylogenetic analysis of influenza subtype H5N1 viruses isolated from Vietnam during 2005-2007 shows that multiple sublineages are present in Vietnam. Clade 2.3.4 viruses have replaced clade 1 viruses in northern Vietnam, and clade 1 viruses have been detected in southern Vietnam. Reassortment between these 2 sublineages has also occurred.

Publication types

Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't

MeSH terms

Animals
Genome, Viral
Influenza A Virus, H5N1 Subtype / genetics*
Influenza in Birds / epidemiology
Influenza in Birds / virology*
Molecular Sequence Data
Poultry / virology
Vietnam / epidemiology

Associated data

GENBANK/CY029508
GENBANK/CY029509
GENBANK/CY029510
GENBANK/CY029511
GENBANK/CY029512
GENBANK/CY029513
GENBANK/CY029514
GENBANK/CY029515
GENBANK/CY029516
GENBANK/CY029517
GENBANK/CY029518
GENBANK/CY029519
GENBANK/CY029520
GENBANK/CY029521
GENBANK/CY029522
GENBANK/CY029523
GENBANK/CY029524
GENBANK/CY029525
GENBANK/CY029526
GENBANK/CY029527
GENBANK/CY029528
GENBANK/CY029529
GENBANK/CY029530
GENBANK/CY029531
GENBANK/CY029532
GENBANK/CY029533
GENBANK/CY029534
GENBANK/CY029535
GENBANK/CY029536
GENBANK/CY029537
GENBANK/CY029538
GENBANK/CY029539
GENBANK/CY029540
GENBANK/CY029541
GENBANK/CY029542
GENBANK/CY029543
GENBANK/CY029544
GENBANK/CY029545
GENBANK/CY029546
GENBANK/CY029547
GENBANK/CY029548
GENBANK/CY029549
GENBANK/CY029550
GENBANK/CY029551
GENBANK/CY029552
GENBANK/CY029553
GENBANK/CY029554
GENBANK/CY029555
GENBANK/CY029556
GENBANK/CY029557
GENBANK/CY029558
GENBANK/CY029559
GENBANK/CY029560
GENBANK/CY029561
GENBANK/CY029562
GENBANK/CY029563
GENBANK/CY029564
GENBANK/CY029565
GENBANK/CY029566
GENBANK/CY029567
GENBANK/CY029568
GENBANK/CY029569
GENBANK/CY029570
GENBANK/CY029571
GENBANK/CY029572
GENBANK/CY029573
GENBANK/CY029574
GENBANK/CY029575
GENBANK/CY029576
GENBANK/CY029577
GENBANK/CY029578
GENBANK/CY029579
GENBANK/CY029580
GENBANK/CY029581
GENBANK/CY029582
GENBANK/CY029583
GENBANK/CY029584
GENBANK/CY029585
GENBANK/CY029586
GENBANK/CY029587
GENBANK/CY029588
GENBANK/CY029589
GENBANK/CY029590
GENBANK/CY029591
GENBANK/CY029592
GENBANK/CY029593
GENBANK/CY029594
GENBANK/CY029595
GENBANK/CY029596
GENBANK/CY029597
GENBANK/CY029598
GENBANK/CY029599
GENBANK/CY029600
GENBANK/CY029601
GENBANK/CY029602
GENBANK/CY029603
GENBANK/CY029604
GENBANK/CY029605
GENBANK/CY029606
GENBANK/CY029607
GENBANK/CY029608
GENBANK/CY029609
GENBANK/CY029610
GENBANK/CY029611
GENBANK/CY029612
GENBANK/CY029613
GENBANK/CY029614
GENBANK/CY029615
GENBANK/CY029616
GENBANK/CY029617
GENBANK/CY029618
GENBANK/CY029619
GENBANK/CY029620
GENBANK/CY029621
GENBANK/CY029622
GENBANK/CY029623
GENBANK/CY029624
GENBANK/CY029625
GENBANK/CY029626
GENBANK/CY029627
GENBANK/CY029628
GENBANK/CY029629
GENBANK/CY029630
GENBANK/CY029631
GENBANK/CY029632
GENBANK/CY029633
GENBANK/CY029634
GENBANK/CY029635
GENBANK/CY029636
GENBANK/CY029637
GENBANK/CY029638
GENBANK/CY029639
GENBANK/CY029640
GENBANK/CY029641
GENBANK/CY029642
GENBANK/CY029643
GENBANK/CY029644
GENBANK/CY029645
GENBANK/CY029646
GENBANK/CY029647
GENBANK/CY029648
GENBANK/CY029649
GENBANK/CY029650
GENBANK/CY029651
GENBANK/CY029652
GENBANK/CY029653
GENBANK/CY029654
GENBANK/CY029655
GENBANK/CY029656
GENBANK/CY029657
GENBANK/CY029658
GENBANK/CY029659
GENBANK/CY029660
GENBANK/CY029661
GENBANK/CY029662
GENBANK/CY029663
GENBANK/CY029664
GENBANK/CY029665
GENBANK/CY029666
GENBANK/CY029667
GENBANK/CY029668
GENBANK/CY029669
GENBANK/CY029670
GENBANK/CY029671
GENBANK/CY029672
GENBANK/CY029673
GENBANK/CY029674
GENBANK/CY029675
GENBANK/CY029676
GENBANK/CY029677
GENBANK/CY029678
GENBANK/CY029679
GENBANK/CY029680
GENBANK/CY029681
GENBANK/CY029682
GENBANK/CY029683
GENBANK/CY029684
GENBANK/CY029685
GENBANK/CY029686
GENBANK/CY029687
GENBANK/CY029688
GENBANK/CY029689
GENBANK/CY029690
GENBANK/CY029691
GENBANK/CY029692
GENBANK/CY029693
GENBANK/CY029694
GENBANK/CY029695
GENBANK/CY029696
GENBANK/CY029697
GENBANK/CY029698
GENBANK/CY029699
GENBANK/CY029700
GENBANK/CY029701
GENBANK/CY029702
GENBANK/CY029703
GENBANK/CY029704
GENBANK/CY029705
GENBANK/CY029706
GENBANK/CY029707
GENBANK/CY029708
GENBANK/CY029709
GENBANK/CY029710
GENBANK/CY029711
GENBANK/CY029712
GENBANK/CY029713
GENBANK/CY029714
GENBANK/CY029715
GENBANK/CY029716
GENBANK/CY029717
GENBANK/CY029718
GENBANK/CY029719
GENBANK/CY029720
GENBANK/CY029721
GENBANK/CY029722
GENBANK/CY029723
GENBANK/CY029724
GENBANK/CY029725
GENBANK/CY029726
GENBANK/CY029727
GENBANK/CY029728
GENBANK/CY029729
GENBANK/CY029730
GENBANK/CY029731
GENBANK/CY029732
GENBANK/CY029733
GENBANK/CY029734
GENBANK/CY029735
GENBANK/CY029736
GENBANK/CY029737
GENBANK/CY029738
GENBANK/CY029739
GENBANK/CY029740
GENBANK/CY029741
GENBANK/CY029742
GENBANK/CY029743
GENBANK/CY029744
GENBANK/CY029745
GENBANK/CY029746
GENBANK/CY029747
GENBANK/CY029748
GENBANK/CY029749
GENBANK/CY029750
GENBANK/CY029751
GENBANK/CY029752
GENBANK/CY029753
GENBANK/CY029754
GENBANK/CY029755
GENBANK/CY029756
GENBANK/CY029757
GENBANK/CY029758
GENBANK/CY029759
GENBANK/CY029760
GENBANK/CY029761
GENBANK/CY029762
GENBANK/CY029763
GENBANK/CY029764
GENBANK/CY029765
GENBANK/CY029766
GENBANK/CY029767
GENBANK/CY029768
GENBANK/CY029769
GENBANK/CY029770
GENBANK/CY029771

Grants and funding

HHSN266200700005C/AI/NIAID NIH HHS/United States