siRNA, miRNA and HIV: promises and challenges

Cell Res. 2005 Nov-Dec;15(11-12):935-46. doi: 10.1038/sj.cr.7290371.

Abstract

Small interfering RNA (siRNA) and microRNA (miRNA) are small RNAs of 18-25 nucleotides (nt) in length that play important roles in regulating gene expression. They are incorporated into an RNA-induced silencing complex (RISC) and serve as guides for silencing their corresponding target mRNAs based on complementary base-pairing. The promise of gene silencing has led many researchers to consider siRNA as an anti-viral tool. However, in long-term settings, many viruses appear to escape from this therapeutical strategy. An example of this may be seen in the case of human immunodeficiency virus type-1 (HIV-1) which is able to evade RNA silencing by either mutating the siRNA-targeted sequence or by encoding for a partial suppressor of RNAi (RNA interference). On the other hand, because miRNA targeting does not require absolute complementarity of base-pairing, mutational escape by viruses from miRNA-specified silencing may be more difficult to achieve. In this review, we discuss stratagems used by various viruses to avoid the cells' antiviral si/mi-RNA defenses and notions of how viruses might control and regulate host cell genes by encoding viral miRNAs (vmiRNAs).

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, P.H.S.
  • Review

MeSH terms

  • HIV / genetics
  • HIV / physiology*
  • HIV Infections / genetics
  • HIV Infections / metabolism*
  • Humans
  • MicroRNAs / isolation & purification
  • MicroRNAs / physiology*
  • RNA, Small Interfering / isolation & purification
  • RNA, Small Interfering / physiology*
  • RNA, Viral / isolation & purification
  • RNA, Viral / physiology*

Substances

  • MicroRNAs
  • RNA, Small Interfering
  • RNA, Viral