A Novel H-NS-like protein from an antarctic psychrophilic bacterium reveals a crucial role for the N-terminal domain in thermal stability

J Biol Chem. 2003 May 23;278(21):18754-60. doi: 10.1074/jbc.M211766200. Epub 2003 Mar 13.

Abstract

We describe here new members of the H-NS protein family identified in a psychrotrophic Acinetobacter spp. bacterium collected in Siberia and in a psychrophilic Psychrobacter spp. bacterium collected in Antarctica. Both are phylogenetically closely related to the HvrA and SPB Rhodobacter transcriptional regulators. Their amino acid sequence shares 40% identity, and their predicted secondary structure displays a structural and functional organization in two modules similar to that of H-NS in Escherichia coli. Remarkably, the Acinetobacter protein fully restores to the wild-type H-NS-dependent phenotypes, whereas the Psychrobacter protein is no longer able to reverse the effects of H-NS deficiency in an E. coli mutant strain above 30 degrees C. Moreover, in vitro experiments demonstrate that the ability of the Psychrobacter H-NS protein to bind curved DNA and to form dimers is altered at 37 degrees C. The construction of hybrid proteins containing the N- or the C-terminal part of E. coli H-NS fused to the C- or N-terminal part of the Psychrobacter protein demonstrates the role of the N-terminal domain in this process. Finally, circular dichroism analysis of purified H-NS proteins suggests that, as compared with the E. coli and Acinetobacter proteins, the alpha-helical domain displays weaker intermolecular interactions in the Psychrobacter protein, which may account for the low thermal stability observed at 37 degrees C.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acinetobacter / chemistry*
  • Amino Acid Sequence
  • Antarctic Regions
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism*
  • Circular Dichroism
  • Cold Temperature
  • DNA / metabolism
  • DNA-Binding Proteins / chemistry*
  • DNA-Binding Proteins / metabolism*
  • Dimerization
  • Drug Stability
  • Escherichia coli / chemistry
  • Gammaproteobacteria / chemistry*
  • Hot Temperature
  • Molecular Sequence Data
  • Protein Structure, Secondary
  • Rhodobacter capsulatus / chemistry
  • Rhodobacter sphaeroides / chemistry
  • Sequence Alignment
  • Siberia
  • Structure-Activity Relationship

Substances

  • Bacterial Proteins
  • DNA-Binding Proteins
  • H-NS protein, bacteria
  • DNA