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    cav caravaggio [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42881, updated on 4-Jul-2024

    Summary

    Official Symbol
    cavprovided by FlyBase
    Official Full Name
    caravaggioprovided by FlyBase
    Primary source
    FLYBASE:FBgn0026257
    Locus tag
    Dmel_CG6219
    See related
    AllianceGenome:FB:FBgn0026257
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    1G5; anon fe 1G5; anon-EST:fe1G5; anon1G5; Anon1G5; Caravaggio; Cav; cav/HOAP; Cav/HOAP; CG6219; Dmel\CG6219; hoap; Hoap; HOAP; p55
    Summary
    Enables telomeric DNA binding activity. Involved in telomere capping. Located in chromosome, centromeric region; chromosome, telomeric region; and nucleus. Part of telomere cap complex. Is expressed in several structures, including extended germ band embryo and salivary gland. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See cav in Genome Data Viewer
    Location:
    95F2-95F2; 3-84 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24221103..24223528)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (20046825..20049250)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene twin Neighboring gene uncharacterized protein Neighboring gene Sp1-like factor for pairing sensitive-silencing Neighboring gene Spase 22/23-subunit Neighboring gene uncharacterized protein Neighboring gene Accessory gland protein 95EF

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    enables telomeric DNA binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in telomere capping IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in telomere capping IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in telomere maintenance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chromosome, centromeric region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in chromosome, telomeric region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of mitochondrial small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of telomere cap complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    caravaggio
    Names
    CG6219-PA
    CG6219-PB
    CG6219-PD
    CG6219-PE
    HP1 and Orc-associated protein
    HP1-ORC associated protein
    HP1/ORC-associated protein
    anon-fast-evolving-1G5
    anonymous fast evolving gene IG5
    cav-PA
    cav-PB
    cav-PD
    cav-PE
    drosophila anonymous fast evolving 1G5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      24221103..24223528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_170135.2NP_732971.2  caravaggio, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732971.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      E4NKN6
      Related
      FBpp0083941
    2. NM_170134.2NP_732970.1  caravaggio, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732970.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95RV2
      Related
      FBpp0083942
    3. NM_079753.4NP_524477.3  caravaggio, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524477.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B6UW60, B6UW70, B6UW72, B6UW76, B6UW79, B6UW88, O16046, O18360, O18361, O18362, O18667, O18675, Q7KLS0, Q7KQE4, Q7KQE8, Q86BN7, Q95RV2, Q9TVU4, Q9U4P0, Q9VCB3
      Related
      FBpp0083943
    4. NM_170133.2NP_732969.1  caravaggio, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732969.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95RV2
      Related
      FBpp0083944