Name: rs1217225
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1217225

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:113597369 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A / G>T
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.492312 (130310/264690, TOPMED)
A=0.447052 (65941/147502, ALFA)
A=0.35352 (9989/28256, 14KJPN) (+ 17 more)
A=0.35471 (5945/16760, 8.3KJPN)
A=0.4493 (2877/6404, 1000G_30x)
A=0.4423 (2215/5008, 1000G)
G=0.4842 (2169/4480, Estonian)
A=0.4642 (1789/3854, ALSPAC)
A=0.4798 (1779/3708, TWINSUK)
A=0.2614 (766/2930, KOREAN)
A=0.4941 (923/1868, HapMap)
A=0.2751 (504/1832, Korea1K)
G=0.493 (492/998, GoNL)
A=0.382 (239/626, Chileans)
G=0.488 (293/600, NorthernSweden)
G=0.334 (123/368, SGDP_PRJ)
A=0.352 (76/216, Qatari)
A=0.206 (44/214, Vietnamese)
A=0.45 (18/40, GENOME_DK)
G=0.39 (15/38, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: MAGI3 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	147502	G=0.552948	A=0.447052, T=0.000000
European	Sub	126334	G=0.546187	A=0.453813, T=0.000000
African	Sub	4896	G=0.4130	A=0.5870, T=0.0000
African Others	Sub	160	G=0.438	A=0.562, T=0.000
African American	Sub	4736	G=0.4122	A=0.5878, T=0.0000
Asian	Sub	624	G=0.771	A=0.229, T=0.000
East Asian	Sub	480	G=0.773	A=0.227, T=0.000
Other Asian	Sub	144	G=0.764	A=0.236, T=0.000
Latin American 1	Sub	792	G=0.494	A=0.506, T=0.000
Latin American 2	Sub	8156	G=0.7162	A=0.2838, T=0.0000
South Asian	Sub	134	G=0.709	A=0.291, T=0.000
Other	Sub	6566	G=0.5679	A=0.4321, T=0.0000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.507688	A=0.492312
Allele Frequency Aggregator	Total	Global	147502	G=0.552948	A=0.447052, T=0.000000
Allele Frequency Aggregator	European	Sub	126334	G=0.546187	A=0.453813, T=0.000000
Allele Frequency Aggregator	Latin American 2	Sub	8156	G=0.7162	A=0.2838, T=0.0000
Allele Frequency Aggregator	Other	Sub	6566	G=0.5679	A=0.4321, T=0.0000
Allele Frequency Aggregator	African	Sub	4896	G=0.4130	A=0.5870, T=0.0000
Allele Frequency Aggregator	Latin American 1	Sub	792	G=0.494	A=0.506, T=0.000
Allele Frequency Aggregator	Asian	Sub	624	G=0.771	A=0.229, T=0.000
Allele Frequency Aggregator	South Asian	Sub	134	G=0.709	A=0.291, T=0.000
14KJPN	JAPANESE	Study-wide	28256	G=0.64648	A=0.35352
8.3KJPN	JAPANESE	Study-wide	16760	G=0.64529	A=0.35471
1000Genomes_30x	Global	Study-wide	6404	G=0.5507	A=0.4493
1000Genomes_30x	African	Sub	1786	G=0.3091	A=0.6909
1000Genomes_30x	Europe	Sub	1266	G=0.5750	A=0.4250
1000Genomes_30x	South Asian	Sub	1202	G=0.6223	A=0.3777
1000Genomes_30x	East Asian	Sub	1170	G=0.7453	A=0.2547
1000Genomes_30x	American	Sub	980	G=0.640	A=0.360
1000Genomes	Global	Study-wide	5008	G=0.5577	A=0.4423
1000Genomes	African	Sub	1322	G=0.3124	A=0.6876
1000Genomes	East Asian	Sub	1008	G=0.7341	A=0.2659
1000Genomes	Europe	Sub	1006	G=0.5795	A=0.4205
1000Genomes	South Asian	Sub	978	G=0.630	A=0.370
1000Genomes	American	Sub	694	G=0.635	A=0.365
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.4842	A=0.5158
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.5358	A=0.4642
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.5202	A=0.4798
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.7386	A=0.2614
HapMap	Global	Study-wide	1868	G=0.5059	A=0.4941
HapMap	American	Sub	762	G=0.601	A=0.399
HapMap	African	Sub	688	G=0.310	A=0.690
HapMap	Asian	Sub	246	G=0.679	A=0.321
HapMap	Europe	Sub	172	G=0.622	A=0.378
Korean Genome Project	KOREAN	Study-wide	1832	G=0.7249	A=0.2751
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.493	A=0.507
Chileans	Chilean	Study-wide	626	G=0.618	A=0.382
Northern Sweden	ACPOP	Study-wide	600	G=0.488	A=0.512
SGDP_PRJ	Global	Study-wide	368	G=0.334	A=0.666
Qatari	Global	Study-wide	216	G=0.648	A=0.352
A Vietnamese Genetic Variation Database	Global	Study-wide	214	G=0.794	A=0.206
The Danish reference pan genome	Danish	Study-wide	40	G=0.55	A=0.45
Siberian	Global	Study-wide	38	G=0.39	A=0.61

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.113597369G>A
GRCh38.p14 chr 1	NC_000001.11:g.113597369G>T
GRCh37.p13 chr 1	NC_000001.10:g.114139991G>A
GRCh37.p13 chr 1	NC_000001.10:g.114139991G>T

Gene: MAGI3, membrane associated guanylate kinase, WW and PDZ domain containing 3 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
MAGI3 transcript variant 1	NM_001142782.2:c.1018+280… NM_001142782.2:c.1018+2809G>A	N/A	Intron Variant
MAGI3 transcript variant 2	NM_152900.3:c.1018+2809G>A	N/A	Intron Variant
MAGI3 transcript variant X2	XM_005270737.4:c.1018+280… XM_005270737.4:c.1018+2809G>A	N/A	Intron Variant
MAGI3 transcript variant X1	XM_017000974.2:c.1018+280… XM_017000974.2:c.1018+2809G>A	N/A	Intron Variant
MAGI3 transcript variant X3	XM_047417371.1:c.1018+280… XM_047417371.1:c.1018+2809G>A	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A	T
GRCh38.p14 chr 1	NC_000001.11:g.113597369=	NC_000001.11:g.113597369G>A	NC_000001.11:g.113597369G>T
GRCh37.p13 chr 1	NC_000001.10:g.114139991=	NC_000001.10:g.114139991G>A	NC_000001.10:g.114139991G>T
MAGI3 transcript variant 1	NM_001142782.1:c.1018+2809=	NM_001142782.1:c.1018+2809G>A	NM_001142782.1:c.1018+2809G>T
MAGI3 transcript variant 1	NM_001142782.2:c.1018+2809=	NM_001142782.2:c.1018+2809G>A	NM_001142782.2:c.1018+2809G>T
MAGI3 transcript variant 2	NM_152900.2:c.1018+2809=	NM_152900.2:c.1018+2809G>A	NM_152900.2:c.1018+2809G>T
MAGI3 transcript variant 2	NM_152900.3:c.1018+2809=	NM_152900.3:c.1018+2809G>A	NM_152900.3:c.1018+2809G>T
MAGI3 transcript variant X1	XM_005270736.1:c.1018+2809=	XM_005270736.1:c.1018+2809G>A	XM_005270736.1:c.1018+2809G>T
MAGI3 transcript variant X2	XM_005270737.1:c.1018+2809=	XM_005270737.1:c.1018+2809G>A	XM_005270737.1:c.1018+2809G>T
MAGI3 transcript variant X2	XM_005270737.4:c.1018+2809=	XM_005270737.4:c.1018+2809G>A	XM_005270737.4:c.1018+2809G>T
MAGI3 transcript variant X1	XM_017000974.2:c.1018+2809=	XM_017000974.2:c.1018+2809G>A	XM_017000974.2:c.1018+2809G>T
MAGI3 transcript variant X3	XM_047417371.1:c.1018+2809=	XM_047417371.1:c.1018+2809G>A	XM_047417371.1:c.1018+2809G>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

110 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	KWOK	ss1774309	Oct 18, 2000 (87)
2	TSC-CSHL	ss2223279	Oct 23, 2000 (88)
3	SC_JCM	ss2641426	Nov 08, 2000 (89)
4	SC_JCM	ss3963166	Sep 28, 2001 (100)
5	SC_SNP	ss13022193	Dec 05, 2003 (119)
6	SSAHASNP	ss20563691	Apr 05, 2004 (121)
7	PERLEGEN	ss24282769	Sep 20, 2004 (123)
8	ABI	ss44053162	Mar 14, 2006 (126)
9	AFFY	ss66433446	Nov 30, 2006 (127)
10	ILLUMINA	ss74884676	Dec 07, 2007 (129)
11	AFFY	ss76208163	Dec 08, 2007 (130)
12	HGSV	ss78477041	Dec 07, 2007 (129)
13	KRIBB_YJKIM	ss81457191	Dec 14, 2007 (130)
14	HGSV	ss84109761	Dec 15, 2007 (130)
15	BCMHGSC_JDW	ss87726706	Mar 23, 2008 (129)
16	HUMANGENOME_JCVI	ss99242200	Feb 06, 2009 (130)
17	1000GENOMES	ss111036550	Jan 25, 2009 (130)
18	ILLUMINA-UK	ss118981516	Dec 01, 2009 (131)
19	ENSEMBL	ss138063288	Dec 01, 2009 (131)
20	ENSEMBL	ss139272373	Dec 01, 2009 (131)
21	ILLUMINA	ss160039035	Dec 01, 2009 (131)
22	COMPLETE_GENOMICS	ss163931139	Jul 04, 2010 (132)
23	COMPLETE_GENOMICS	ss165057609	Jul 04, 2010 (132)
24	COMPLETE_GENOMICS	ss167018202	Jul 04, 2010 (132)
25	ILLUMINA	ss171909668	Jul 04, 2010 (132)
26	AFFY	ss172816200	Jul 04, 2010 (132)
27	BUSHMAN	ss198954120	Jul 04, 2010 (132)
28	BCM-HGSC-SUB	ss205071051	Jul 04, 2010 (132)
29	1000GENOMES	ss218605987	Jul 14, 2010 (132)
30	1000GENOMES	ss230698383	Jul 14, 2010 (132)
31	1000GENOMES	ss238354720	Jul 15, 2010 (132)
32	GMI	ss275984395	May 04, 2012 (137)
33	PJP	ss290602135	May 09, 2011 (134)
34	ILLUMINA	ss410898032	Sep 17, 2011 (135)
35	ILLUMINA	ss479686736	May 04, 2012 (137)
36	ILLUMINA	ss479692297	May 04, 2012 (137)
37	ILLUMINA	ss480221731	Sep 08, 2015 (146)
38	ILLUMINA	ss484641931	May 04, 2012 (137)
39	ILLUMINA	ss536760586	Sep 08, 2015 (146)
40	TISHKOFF	ss554594181	Apr 25, 2013 (138)
41	SSMP	ss648323513	Apr 25, 2013 (138)
42	ILLUMINA	ss778401347	Aug 21, 2014 (142)
43	ILLUMINA	ss782767797	Aug 21, 2014 (142)
44	ILLUMINA	ss783734033	Aug 21, 2014 (142)
45	ILLUMINA	ss832020162	Apr 01, 2015 (144)
46	ILLUMINA	ss833856525	Aug 21, 2014 (142)
47	EVA-GONL	ss975587180	Aug 21, 2014 (142)
48	JMKIDD_LAB	ss1068205415	Aug 21, 2014 (142)
49	1000GENOMES	ss1292496907	Aug 21, 2014 (142)
50	DDI	ss1425942270	Apr 01, 2015 (144)
51	EVA_GENOME_DK	ss1574333794	Apr 01, 2015 (144)
52	EVA_DECODE	ss1584968048	Apr 01, 2015 (144)
53	EVA_UK10K_ALSPAC	ss1601024619	Apr 01, 2015 (144)
54	EVA_UK10K_TWINSUK	ss1644018652	Apr 01, 2015 (144)
55	EVA_SVP	ss1712364375	Apr 01, 2015 (144)
56	ILLUMINA	ss1751864491	Sep 08, 2015 (146)
57	HAMMER_LAB	ss1794956992	Sep 08, 2015 (146)
58	WEILL_CORNELL_DGM	ss1918787456	Feb 12, 2016 (147)
59	JJLAB	ss2019918194	Sep 14, 2016 (149)
60	USC_VALOUEV	ss2147936912	Dec 20, 2016 (150)
61	HUMAN_LONGEVITY	ss2165846305	Dec 20, 2016 (150)
62	SYSTEMSBIOZJU	ss2624468729	Nov 08, 2017 (151)
63	ILLUMINA	ss2632565342	Nov 08, 2017 (151)
64	ILLUMINA	ss2632565343	Nov 08, 2017 (151)
65	GRF	ss2697867204	Nov 08, 2017 (151)
66	GNOMAD	ss2759743892	Nov 08, 2017 (151)
67	SWEGEN	ss2987465067	Nov 08, 2017 (151)
68	BIOINF_KMB_FNS_UNIBA	ss3023723628	Nov 08, 2017 (151)
69	CSHL	ss3343642680	Nov 08, 2017 (151)
70	ILLUMINA	ss3626186637	Oct 11, 2018 (152)
71	ILLUMINA	ss3630598911	Oct 11, 2018 (152)
72	ILLUMINA	ss3632906747	Oct 11, 2018 (152)
73	ILLUMINA	ss3633601906	Oct 11, 2018 (152)
74	ILLUMINA	ss3634344013	Oct 11, 2018 (152)
75	ILLUMINA	ss3635295438	Oct 11, 2018 (152)
76	ILLUMINA	ss3636022109	Oct 11, 2018 (152)
77	ILLUMINA	ss3637045909	Oct 11, 2018 (152)
78	ILLUMINA	ss3637781083	Oct 11, 2018 (152)
79	ILLUMINA	ss3640051372	Oct 11, 2018 (152)
80	ILLUMINA	ss3642790773	Oct 11, 2018 (152)
81	URBANLAB	ss3646756250	Oct 11, 2018 (152)
82	EGCUT_WGS	ss3655554048	Jul 12, 2019 (153)
83	EVA_DECODE	ss3687562847	Jul 12, 2019 (153)
84	ACPOP	ss3727402672	Jul 12, 2019 (153)
85	ILLUMINA	ss3744644961	Jul 12, 2019 (153)
86	EVA	ss3746692124	Jul 12, 2019 (153)
87	ILLUMINA	ss3772146156	Jul 12, 2019 (153)
88	KHV_HUMAN_GENOMES	ss3799694917	Jul 12, 2019 (153)
89	EVA	ss3826378474	Apr 25, 2020 (154)
90	EVA	ss3836580939	Apr 25, 2020 (154)
91	EVA	ss3841989377	Apr 25, 2020 (154)
92	SGDP_PRJ	ss3849683530	Apr 25, 2020 (154)
93	KRGDB	ss3894781576	Apr 25, 2020 (154)
94	KOGIC	ss3945280388	Apr 25, 2020 (154)
95	TOPMED	ss4464171376	Apr 25, 2021 (155)
96	TOMMO_GENOMICS	ss5145754266	Apr 25, 2021 (155)
97	1000G_HIGH_COVERAGE	ss5243665417	Oct 12, 2022 (156)
98	EVA	ss5314645116	Oct 12, 2022 (156)
99	EVA	ss5321286460	Oct 12, 2022 (156)
100	HUGCELL_USP	ss5444583293	Oct 12, 2022 (156)
101	EVA	ss5506002460	Oct 12, 2022 (156)
102	1000G_HIGH_COVERAGE	ss5516687321	Oct 12, 2022 (156)
103	SANFORD_IMAGENETICS	ss5626330376	Oct 12, 2022 (156)
104	TOMMO_GENOMICS	ss5671044785	Oct 12, 2022 (156)
105	EVA	ss5799496395	Oct 12, 2022 (156)
106	YY_MCH	ss5800945788	Oct 12, 2022 (156)
107	EVA	ss5832505801	Oct 12, 2022 (156)
108	EVA	ss5849074482	Oct 12, 2022 (156)
109	EVA	ss5909865417	Oct 12, 2022 (156)
110	EVA	ss5938197983	Oct 12, 2022 (156)
111	1000Genomes	NC_000001.10 - 114139991	Oct 11, 2018 (152)
112	1000Genomes_30x	NC_000001.11 - 113597369	Oct 12, 2022 (156)
113	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 114139991	Oct 11, 2018 (152)
114	Chileans	NC_000001.10 - 114139991	Apr 25, 2020 (154)
115	Genetic variation in the Estonian population	NC_000001.10 - 114139991	Oct 11, 2018 (152)
116	The Danish reference pan genome	NC_000001.10 - 114139991	Apr 25, 2020 (154)
117	gnomAD - Genomes Submission ignored due to conflicting rows: Row 23162272 (NC_000001.11:113597368:G:A 70426/139986) Row 23162273 (NC_000001.11:113597368:G:T 1/140050)	-	Apr 25, 2021 (155)
118	gnomAD - Genomes Submission ignored due to conflicting rows: Row 23162272 (NC_000001.11:113597368:G:A 70426/139986) Row 23162273 (NC_000001.11:113597368:G:T 1/140050)	-	Apr 25, 2021 (155)
119	Genome of the Netherlands Release 5	NC_000001.10 - 114139991	Apr 25, 2020 (154)
120	HapMap	NC_000001.11 - 113597369	Apr 25, 2020 (154)
121	KOREAN population from KRGDB	NC_000001.10 - 114139991	Apr 25, 2020 (154)
122	Korean Genome Project	NC_000001.11 - 113597369	Apr 25, 2020 (154)
123	Northern Sweden	NC_000001.10 - 114139991	Jul 12, 2019 (153)
124	Qatari	NC_000001.10 - 114139991	Apr 25, 2020 (154)
125	SGDP_PRJ	NC_000001.10 - 114139991	Apr 25, 2020 (154)
126	Siberian	NC_000001.10 - 114139991	Apr 25, 2020 (154)
127	8.3KJPN	NC_000001.10 - 114139991	Apr 25, 2021 (155)
128	14KJPN	NC_000001.11 - 113597369	Oct 12, 2022 (156)
129	TopMed	NC_000001.11 - 113597369	Apr 25, 2021 (155)
130	UK 10K study - Twins	NC_000001.10 - 114139991	Oct 11, 2018 (152)
131	A Vietnamese Genetic Variation Database	NC_000001.10 - 114139991	Jul 12, 2019 (153)
132	ALFA	NC_000001.11 - 113597369	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs17688503	Oct 07, 2004 (123)
rs56643677	May 27, 2008 (130)
rs56778348	Feb 27, 2009 (130)
rs60800974	May 26, 2008 (130)
rs386523114	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss78477041, ss84109761	NC_000001.8:113852032:G:A	NC_000001.11:113597368:G:A	(self)
ss87726706, ss111036550, ss118981516, ss163931139, ss165057609, ss167018202, ss198954120, ss205071051, ss275984395, ss290602135, ss410898032, ss479686736, ss1584968048, ss1712364375, ss3642790773	NC_000001.9:113941513:G:A	NC_000001.11:113597368:G:A	(self)
3275093, 1811953, 18978, 1292296, 1671486, 788041, 1958970, 687537, 829386, 1700510, 453266, 3723573, 1811953, 392362, ss218605987, ss230698383, ss238354720, ss479692297, ss480221731, ss484641931, ss536760586, ss554594181, ss648323513, ss778401347, ss782767797, ss783734033, ss832020162, ss833856525, ss975587180, ss1068205415, ss1292496907, ss1425942270, ss1574333794, ss1601024619, ss1644018652, ss1751864491, ss1794956992, ss1918787456, ss2019918194, ss2147936912, ss2624468729, ss2632565342, ss2632565343, ss2697867204, ss2759743892, ss2987465067, ss3343642680, ss3626186637, ss3630598911, ss3632906747, ss3633601906, ss3634344013, ss3635295438, ss3636022109, ss3637045909, ss3637781083, ss3640051372, ss3655554048, ss3727402672, ss3744644961, ss3746692124, ss3772146156, ss3826378474, ss3836580939, ss3849683530, ss3894781576, ss5145754266, ss5314645116, ss5321286460, ss5506002460, ss5626330376, ss5799496395, ss5832505801, ss5938197983	NC_000001.10:114139990:G:A	NC_000001.11:113597368:G:A	(self)
4213256, 158305, 1658389, 4881889, 27777711, 8909764524, ss2165846305, ss3023723628, ss3646756250, ss3687562847, ss3799694917, ss3841989377, ss3945280388, ss4464171376, ss5243665417, ss5444583293, ss5516687321, ss5671044785, ss5800945788, ss5849074482, ss5909865417	NC_000001.11:113597368:G:A	NC_000001.11:113597368:G:A	(self)
ss13022193	NT_019273.15:4575794:G:A	NC_000001.11:113597368:G:A	(self)
ss20563691	NT_019273.16:5135938:G:A	NC_000001.11:113597368:G:A	(self)
ss1774309, ss2223279, ss2641426, ss3963166, ss24282769, ss44053162, ss66433446, ss74884676, ss76208163, ss81457191, ss99242200, ss138063288, ss139272373, ss160039035, ss171909668, ss172816200	NT_032977.9:84111908:G:A	NC_000001.11:113597368:G:A	(self)
8909764524	NC_000001.11:113597368:G:T	NC_000001.11:113597368:G:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1217225

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1217225