Name: rs1045873
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1045873

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr10:24848843 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: A>C
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.261729 (69277/264690, TOPMED)
C=0.355215 (72846/205076, GENOGRAPHIC)
C=0.351444 (65488/186340, ALFA) (+ 21 more)
C=0.286656 (40145/140046, GnomAD)
C=0.19587 (15403/78640, PAGE_STUDY)
C=0.19757 (5583/28258, 14KJPN)
C=0.19600 (3285/16760, 8.3KJPN)
C=0.2258 (1131/5008, 1000G)
C=0.4989 (2235/4480, Estonian)
C=0.3941 (1519/3854, ALSPAC)
C=0.3660 (1357/3708, TWINSUK)
C=0.1819 (533/2930, KOREAN)
C=0.2303 (480/2084, HGDP_Stanford)
C=0.1865 (351/1882, HapMap)
C=0.1774 (325/1832, Korea1K)
C=0.406 (405/998, GoNL)
C=0.180 (141/784, PRJEB37584)
C=0.482 (289/600, NorthernSweden)
A=0.395 (87/220, SGDP_PRJ)
C=0.278 (60/216, Qatari)
C=0.165 (35/212, Vietnamese)
C=0.45 (18/40, GENOME_DK)
A=0.32 (12/38, Siberian)
C=0.29 (4/14, Ancient Sardinia)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PRTFDC1 : 3 Prime UTR Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	186340	A=0.648556	C=0.351444	0.426393	0.12928	0.444328	32
European	Sub	162958	A=0.631604	C=0.368396	0.400839	0.137631	0.46153	3
African	Sub	7652	A=0.9183	C=0.0817	0.847099	0.010455	0.142446	6
African Others	Sub	248	A=0.984	C=0.016	0.967742	0.0	0.032258	0
African American	Sub	7404	A=0.9161	C=0.0839	0.843058	0.010805	0.146137	5
Asian	Sub	606	A=0.802	C=0.198	0.653465	0.049505	0.29703	1
East Asian	Sub	494	A=0.812	C=0.188	0.668016	0.044534	0.287449	1
Other Asian	Sub	112	A=0.759	C=0.241	0.589286	0.071429	0.339286	0
Latin American 1	Sub	778	A=0.713	C=0.287	0.521851	0.095116	0.383033	1
Latin American 2	Sub	3636	A=0.6859	C=0.3141	0.468647	0.09681	0.434543	0
South Asian	Sub	5038	A=0.6959	C=0.3041	0.49345	0.101628	0.404923	3
Other	Sub	5672	A=0.6804	C=0.3196	0.46897	0.108251	0.422779	1

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	A=0.738271	C=0.261729
Genographic Project	Global	Study-wide	205076	A=0.644785	C=0.355215
Allele Frequency Aggregator	Total	Global	186340	A=0.648556	C=0.351444
Allele Frequency Aggregator	European	Sub	162958	A=0.631604	C=0.368396
Allele Frequency Aggregator	African	Sub	7652	A=0.9183	C=0.0817
Allele Frequency Aggregator	Other	Sub	5672	A=0.6804	C=0.3196
Allele Frequency Aggregator	South Asian	Sub	5038	A=0.6959	C=0.3041
Allele Frequency Aggregator	Latin American 2	Sub	3636	A=0.6859	C=0.3141
Allele Frequency Aggregator	Latin American 1	Sub	778	A=0.713	C=0.287
Allele Frequency Aggregator	Asian	Sub	606	A=0.802	C=0.198
gnomAD - Genomes	Global	Study-wide	140046	A=0.713344	C=0.286656
gnomAD - Genomes	European	Sub	75812	A=0.59607	C=0.40393
gnomAD - Genomes	African	Sub	42006	A=0.91720	C=0.08280
gnomAD - Genomes	American	Sub	13626	A=0.70820	C=0.29180
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	A=0.7131	C=0.2869
gnomAD - Genomes	East Asian	Sub	3130	A=0.8220	C=0.1780
gnomAD - Genomes	Other	Sub	2150	A=0.7405	C=0.2595
The PAGE Study	Global	Study-wide	78640	A=0.80413	C=0.19587
The PAGE Study	AfricanAmerican	Sub	32494	A=0.90838	C=0.09162
The PAGE Study	Mexican	Sub	10796	A=0.66043	C=0.33957
The PAGE Study	Asian	Sub	8314	A=0.7916	C=0.2084
The PAGE Study	PuertoRican	Sub	7914	A=0.7550	C=0.2450
The PAGE Study	NativeHawaiian	Sub	4530	A=0.7419	C=0.2581
The PAGE Study	Cuban	Sub	4228	A=0.7502	C=0.2498
The PAGE Study	Dominican	Sub	3822	A=0.8061	C=0.1939
The PAGE Study	CentralAmerican	Sub	2446	A=0.6917	C=0.3083
The PAGE Study	SouthAmerican	Sub	1982	A=0.6630	C=0.3370
The PAGE Study	NativeAmerican	Sub	1258	A=0.6288	C=0.3712
The PAGE Study	SouthAsian	Sub	856	A=0.728	C=0.272
14KJPN	JAPANESE	Study-wide	28258	A=0.80243	C=0.19757
8.3KJPN	JAPANESE	Study-wide	16760	A=0.80400	C=0.19600
1000Genomes	Global	Study-wide	5008	A=0.7742	C=0.2258
1000Genomes	African	Sub	1322	A=0.9667	C=0.0333
1000Genomes	East Asian	Sub	1008	A=0.8056	C=0.1944
1000Genomes	Europe	Sub	1006	A=0.6282	C=0.3718
1000Genomes	South Asian	Sub	978	A=0.711	C=0.289
1000Genomes	American	Sub	694	A=0.663	C=0.337
Genetic variation in the Estonian population	Estonian	Study-wide	4480	A=0.5011	C=0.4989
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.6059	C=0.3941
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.6340	C=0.3660
KOREAN population from KRGDB	KOREAN	Study-wide	2930	A=0.8181	C=0.1819
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	A=0.7697	C=0.2303
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	A=0.774	C=0.226
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	A=0.655	C=0.345
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	A=0.794	C=0.206
HGDP-CEPH-db Supplement 1	Europe	Sub	320	A=0.681	C=0.319
HGDP-CEPH-db Supplement 1	Africa	Sub	242	A=0.988	C=0.012
HGDP-CEPH-db Supplement 1	America	Sub	216	A=0.755	C=0.245
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	A=0.99	C=0.01
HapMap	Global	Study-wide	1882	A=0.8135	C=0.1865
HapMap	American	Sub	762	A=0.710	C=0.290
HapMap	African	Sub	692	A=0.954	C=0.046
HapMap	Asian	Sub	252	A=0.841	C=0.159
HapMap	Europe	Sub	176	A=0.670	C=0.330
Korean Genome Project	KOREAN	Study-wide	1832	A=0.8226	C=0.1774
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	A=0.594	C=0.406
CNV burdens in cranial meningiomas	Global	Study-wide	784	A=0.820	C=0.180
CNV burdens in cranial meningiomas	CRM	Sub	784	A=0.820	C=0.180
Northern Sweden	ACPOP	Study-wide	600	A=0.518	C=0.482
SGDP_PRJ	Global	Study-wide	220	A=0.395	C=0.605
Qatari	Global	Study-wide	216	A=0.722	C=0.278
A Vietnamese Genetic Variation Database	Global	Study-wide	212	A=0.835	C=0.165
The Danish reference pan genome	Danish	Study-wide	40	A=0.55	C=0.45
Siberian	Global	Study-wide	38	A=0.32	C=0.68
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	14	A=0.71	C=0.29

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 10	NC_000010.11:g.24848843A>C
GRCh37.p13 chr 10	NC_000010.10:g.25137772A>C

Gene: PRTFDC1, phosphoribosyl transferase domain containing 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PRTFDC1 transcript variant 1	NM_020200.7:c.*1001=	N/A	3 Prime UTR Variant
PRTFDC1 transcript variant 2	NM_001282786.2:c.*1029=	N/A	3 Prime UTR Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	A=	C
GRCh38.p14 chr 10	NC_000010.11:g.24848843=	NC_000010.11:g.24848843A>C
GRCh37.p13 chr 10	NC_000010.10:g.25137772=	NC_000010.10:g.25137772A>C
PRTFDC1 transcript variant 1	NM_020200.7:c.*1001=	NM_020200.7:c.*1001T>G
PRTFDC1 transcript variant 1	NM_020200.6:c.*1001=	NM_020200.6:c.*1001T>G
PRTFDC1 transcript	NM_020200.5:c.*1001=	NM_020200.5:c.*1001T>G
PRTFDC1 transcript variant 2	NM_001282786.2:c.*1029=	NM_001282786.2:c.*1029T>G
PRTFDC1 transcript variant 2	NM_001282786.1:c.*1029=	NM_001282786.1:c.*1029T>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

126 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	LEE	ss1516543	Oct 05, 2000 (86)
2	CGAP-GAI	ss4321590	Jan 04, 2002 (102)
3	LEE	ss4392379	May 29, 2002 (106)
4	LEE	ss4409159	May 29, 2002 (106)
5	BCM_SSAHASNP	ss10619810	Jul 11, 2003 (116)
6	SC_SNP	ss12969615	Dec 05, 2003 (119)
7	SC_SNP	ss16062616	Feb 27, 2004 (120)
8	CGAP-GAI	ss16225440	Feb 27, 2004 (120)
9	CSHL-HAPMAP	ss19175254	Feb 27, 2004 (120)
10	SSAHASNP	ss20652469	Apr 05, 2004 (121)
11	PERLEGEN	ss24466318	Sep 20, 2004 (123)
12	ABI	ss38639304	Mar 13, 2006 (126)
13	SI_EXO	ss52067333	Oct 16, 2006 (127)
14	AFFY	ss66107703	Dec 01, 2006 (127)
15	ILLUMINA	ss66793532	Dec 01, 2006 (127)
16	ILLUMINA	ss66883835	Dec 01, 2006 (127)
17	ILLUMINA	ss66978820	Dec 01, 2006 (127)
18	ILLUMINA	ss70366056	May 18, 2007 (127)
19	ILLUMINA	ss70479581	May 26, 2008 (130)
20	ILLUMINA	ss71003084	May 18, 2007 (127)
21	ILLUMINA	ss75825284	Dec 07, 2007 (129)
22	AFFY	ss76084005	Dec 07, 2007 (129)
23	KRIBB_YJKIM	ss83672928	Dec 15, 2007 (130)
24	BCMHGSC_JDW	ss88131640	Mar 23, 2008 (129)
25	ILLUMINA	ss121308030	Dec 01, 2009 (131)
26	ENSEMBL	ss138725457	Dec 01, 2009 (131)
27	ILLUMINA	ss152730069	Dec 01, 2009 (131)
28	ILLUMINA	ss159124398	Dec 01, 2009 (131)
29	ILLUMINA	ss159895615	Dec 01, 2009 (131)
30	ILLUMINA	ss169392869	Jul 04, 2010 (132)
31	ILLUMINA	ss170104143	Jul 04, 2010 (132)
32	COMPLETE_GENOMICS	ss170657917	Jul 04, 2010 (132)
33	AFFY	ss172446567	Jun 24, 2010 (142)
34	BCM-HGSC-SUB	ss207014745	Jul 04, 2010 (132)
35	1000GENOMES	ss235100109	Jul 15, 2010 (132)
36	1000GENOMES	ss241822955	Jul 15, 2010 (132)
37	BL	ss254145898	May 09, 2011 (134)
38	GMI	ss286148362	Apr 25, 2013 (138)
39	PJP	ss290996743	May 09, 2011 (134)
40	ILLUMINA	ss479274711	May 04, 2012 (137)
41	ILLUMINA	ss479648263	Sep 08, 2015 (146)
42	ILLUMINA	ss533628465	Sep 08, 2015 (146)
43	SSMP	ss656435810	Apr 25, 2013 (138)
44	ILLUMINA	ss825335787	Apr 01, 2015 (144)
45	ILLUMINA	ss831915300	Sep 08, 2015 (146)
46	ILLUMINA	ss832637111	Jul 13, 2019 (153)
47	EVA-GONL	ss987307172	Aug 21, 2014 (142)
48	JMKIDD_LAB	ss1076849663	Aug 21, 2014 (142)
49	1000GENOMES	ss1336714865	Aug 21, 2014 (142)
50	DDI	ss1426255852	Apr 01, 2015 (144)
51	EVA_GENOME_DK	ss1574990569	Apr 01, 2015 (144)
52	EVA_UK10K_ALSPAC	ss1624218633	Apr 01, 2015 (144)
53	EVA_UK10K_TWINSUK	ss1667212666	Apr 01, 2015 (144)
54	EVA_SVP	ss1713166776	Apr 01, 2015 (144)
55	ILLUMINA	ss1751962886	Sep 08, 2015 (146)
56	WEILL_CORNELL_DGM	ss1930637509	Feb 12, 2016 (147)
57	ILLUMINA	ss1959248268	Feb 12, 2016 (147)
58	GENOMED	ss1967085025	Jul 19, 2016 (147)
59	JJLAB	ss2026046484	Sep 14, 2016 (149)
60	USC_VALOUEV	ss2154291066	Dec 20, 2016 (150)
61	HUMAN_LONGEVITY	ss2173551787	Dec 20, 2016 (150)
62	SYSTEMSBIOZJU	ss2627492881	Nov 08, 2017 (151)
63	ILLUMINA	ss2632690740	Nov 08, 2017 (151)
64	GRF	ss2698523164	Nov 08, 2017 (151)
65	SWEGEN	ss3006117683	Nov 08, 2017 (151)
66	ILLUMINA	ss3021224412	Nov 08, 2017 (151)
67	BIOINF_KMB_FNS_UNIBA	ss3026809045	Nov 08, 2017 (151)
68	CSHL	ss3349014914	Nov 08, 2017 (151)
69	ILLUMINA	ss3625576121	Oct 12, 2018 (152)
70	ILLUMINA	ss3626412164	Oct 12, 2018 (152)
71	ILLUMINA	ss3632943461	Oct 12, 2018 (152)
72	ILLUMINA	ss3633640322	Oct 12, 2018 (152)
73	ILLUMINA	ss3634396037	Oct 12, 2018 (152)
74	ILLUMINA	ss3635333008	Oct 12, 2018 (152)
75	ILLUMINA	ss3636076873	Oct 12, 2018 (152)
76	ILLUMINA	ss3637083619	Oct 12, 2018 (152)
77	ILLUMINA	ss3637840870	Oct 12, 2018 (152)
78	ILLUMINA	ss3638936306	Oct 12, 2018 (152)
79	ILLUMINA	ss3639467607	Oct 12, 2018 (152)
80	ILLUMINA	ss3640103379	Oct 12, 2018 (152)
81	ILLUMINA	ss3642844976	Oct 12, 2018 (152)
82	ILLUMINA	ss3644531177	Oct 12, 2018 (152)
83	OMUKHERJEE_ADBS	ss3646403801	Oct 12, 2018 (152)
84	URBANLAB	ss3649315045	Oct 12, 2018 (152)
85	ILLUMINA	ss3651574685	Oct 12, 2018 (152)
86	EGCUT_WGS	ss3673645210	Jul 13, 2019 (153)
87	EVA_DECODE	ss3689502687	Jul 13, 2019 (153)
88	ILLUMINA	ss3725144847	Jul 13, 2019 (153)
89	ACPOP	ss3737158532	Jul 13, 2019 (153)
90	ILLUMINA	ss3744696946	Jul 13, 2019 (153)
91	EVA	ss3747883520	Jul 13, 2019 (153)
92	PAGE_CC	ss3771549105	Jul 13, 2019 (153)
93	ILLUMINA	ss3772197556	Jul 13, 2019 (153)
94	PACBIO	ss3786614109	Jul 13, 2019 (153)
95	PACBIO	ss3791802251	Jul 13, 2019 (153)
96	PACBIO	ss3796684208	Jul 13, 2019 (153)
97	KHV_HUMAN_GENOMES	ss3813245892	Jul 13, 2019 (153)
98	EVA	ss3825772905	Apr 26, 2020 (154)
99	EVA	ss3832026109	Apr 26, 2020 (154)
100	EVA	ss3839544578	Apr 26, 2020 (154)
101	EVA	ss3845011712	Apr 26, 2020 (154)
102	HGDP	ss3847380194	Apr 26, 2020 (154)
103	SGDP_PRJ	ss3873774268	Apr 26, 2020 (154)
104	KRGDB	ss3921737695	Apr 26, 2020 (154)
105	KOGIC	ss3967416119	Apr 26, 2020 (154)
106	FSA-LAB	ss3983974692	Apr 26, 2021 (155)
107	EVA	ss3984631597	Apr 26, 2021 (155)
108	EVA	ss3985465351	Apr 26, 2021 (155)
109	EVA	ss3986049408	Apr 26, 2021 (155)
110	EVA	ss4017477016	Apr 26, 2021 (155)
111	GNOMAD	ss4214812635	Apr 26, 2021 (155)
112	TOPMED	ss4846141951	Apr 26, 2021 (155)
113	TOMMO_GENOMICS	ss5196761825	Apr 26, 2021 (155)
114	1000G_HIGH_COVERAGE	ss5283312732	Oct 16, 2022 (156)
115	GENOGRAPHIC	ss5314538583	Oct 16, 2022 (156)
116	EVA	ss5315461118	Oct 16, 2022 (156)
117	EVA	ss5392295515	Oct 16, 2022 (156)
118	HUGCELL_USP	ss5479046709	Oct 16, 2022 (156)
119	TOMMO_GENOMICS	ss5741755062	Oct 16, 2022 (156)
120	EVA	ss5799807653	Oct 16, 2022 (156)
121	YY_MCH	ss5811295685	Oct 16, 2022 (156)
122	EVA	ss5824130594	Oct 16, 2022 (156)
123	EVA	ss5847590547	Oct 16, 2022 (156)
124	EVA	ss5849486983	Oct 16, 2022 (156)
125	EVA	ss5878181504	Oct 16, 2022 (156)
126	EVA	ss5940192100	Oct 16, 2022 (156)
127	1000Genomes	NC_000010.10 - 25137772	Oct 12, 2018 (152)
128	The Avon Longitudinal Study of Parents and Children	NC_000010.10 - 25137772	Oct 12, 2018 (152)
129	Genetic variation in the Estonian population	NC_000010.10 - 25137772	Oct 12, 2018 (152)
130	Genographic Project	NC_000010.11 - 24848843	Oct 16, 2022 (156)
131	The Danish reference pan genome	NC_000010.10 - 25137772	Apr 26, 2020 (154)
132	gnomAD - Genomes	NC_000010.11 - 24848843	Apr 26, 2021 (155)
133	Genome of the Netherlands Release 5	NC_000010.10 - 25137772	Apr 26, 2020 (154)
134	HGDP-CEPH-db Supplement 1	NC_000010.9 - 25177778	Apr 26, 2020 (154)
135	HapMap	NC_000010.11 - 24848843	Apr 26, 2020 (154)
136	KOREAN population from KRGDB	NC_000010.10 - 25137772	Apr 26, 2020 (154)
137	Korean Genome Project	NC_000010.11 - 24848843	Apr 26, 2020 (154)
138	Northern Sweden	NC_000010.10 - 25137772	Jul 13, 2019 (153)
139	The PAGE Study	NC_000010.11 - 24848843	Jul 13, 2019 (153)
140	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000010.10 - 25137772	Apr 26, 2021 (155)
141	CNV burdens in cranial meningiomas	NC_000010.10 - 25137772	Apr 26, 2021 (155)
142	Qatari	NC_000010.10 - 25137772	Apr 26, 2020 (154)
143	SGDP_PRJ	NC_000010.10 - 25137772	Apr 26, 2020 (154)
144	Siberian	NC_000010.10 - 25137772	Apr 26, 2020 (154)
145	8.3KJPN	NC_000010.10 - 25137772	Apr 26, 2021 (155)
146	14KJPN	NC_000010.11 - 24848843	Oct 16, 2022 (156)
147	TopMed	NC_000010.11 - 24848843	Apr 26, 2021 (155)
148	UK 10K study - Twins	NC_000010.10 - 25137772	Oct 12, 2018 (152)
149	A Vietnamese Genetic Variation Database	NC_000010.10 - 25137772	Jul 13, 2019 (153)
150	ALFA	NC_000010.11 - 24848843	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs3167918	Jul 03, 2002 (106)
rs17521214	Oct 08, 2004 (123)
rs60823181	May 26, 2008 (130)
rs111176893	Aug 21, 2014 (142)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3638936306, ss3639467607	NC_000010.8:25177777:A:C	NC_000010.11:24848842:A:C	(self)
58086, ss66107703, ss76084005, ss88131640, ss170657917, ss172446567, ss207014745, ss254145898, ss286148362, ss290996743, ss825335787, ss1713166776, ss3642844976, ss3847380194	NC_000010.9:25177777:A:C	NC_000010.11:24848842:A:C	(self)
49076702, 27268858, 19383458, 2078167, 12157860, 28915089, 10443397, 691278, 181054, 12679439, 25791248, 6807420, 54731132, 27268858, 6054883, ss235100109, ss241822955, ss479274711, ss479648263, ss533628465, ss656435810, ss831915300, ss832637111, ss987307172, ss1076849663, ss1336714865, ss1426255852, ss1574990569, ss1624218633, ss1667212666, ss1751962886, ss1930637509, ss1959248268, ss1967085025, ss2026046484, ss2154291066, ss2627492881, ss2632690740, ss2698523164, ss3006117683, ss3021224412, ss3349014914, ss3625576121, ss3626412164, ss3632943461, ss3633640322, ss3634396037, ss3635333008, ss3636076873, ss3637083619, ss3637840870, ss3640103379, ss3644531177, ss3646403801, ss3651574685, ss3673645210, ss3737158532, ss3744696946, ss3747883520, ss3772197556, ss3786614109, ss3791802251, ss3796684208, ss3825772905, ss3832026109, ss3839544578, ss3873774268, ss3921737695, ss3983974692, ss3984631597, ss3985465351, ss3986049408, ss4017477016, ss5196761825, ss5315461118, ss5392295515, ss5799807653, ss5824130594, ss5847590547, ss5940192100	NC_000010.10:25137771:A:C	NC_000010.11:24848842:A:C	(self)
99810, 346573291, 363698, 23794120, 770574, 75592166, 61687606, 9354998482, ss2173551787, ss3026809045, ss3649315045, ss3689502687, ss3725144847, ss3771549105, ss3813245892, ss3845011712, ss3967416119, ss4214812635, ss4846141951, ss5283312732, ss5314538583, ss5479046709, ss5741755062, ss5811295685, ss5849486983, ss5878181504	NC_000010.11:24848842:A:C	NC_000010.11:24848842:A:C	(self)
ss10619810, ss12969615	NT_008705.14:7113096:A:C	NC_000010.11:24848842:A:C	(self)
ss16062616, ss19175254, ss20652469, ss52067333	NT_008705.15:7113096:A:C	NC_000010.11:24848842:A:C	(self)
ss1516543, ss4321590, ss4392379, ss4409159, ss16225440, ss24466318, ss38639304, ss66793532, ss66883835, ss66978820, ss70366056, ss70479581, ss71003084, ss75825284, ss83672928, ss121308030, ss138725457, ss152730069, ss159124398, ss159895615, ss169392869, ss170104143	NT_008705.16:25077771:A:C	NC_000010.11:24848842:A:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1045873

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1045873