txid186103[Organism:noexp] - PMC

Select item 57532771.

PRODORIC2: the bacterial gene regulation database in 2018

Denitsa Eckweiler, Christian-Alexander Dudek, Juliane Hartlich, David Brötje, Dieter Jahn

Nucleic Acids Res. 2018 Jan 4; 46(Database issue): D320–D326. Published online 2017 Nov 9. doi: 10.1093/nar/gkx1091

PMCID:: PMC5753277

Article PDF–2.2M

Select item 42995202.

Genome-wide gene order distances support clustering the gram-positive bacteria

Christopher H. House, Matteo Pellegrini, Sorel T. Fitz-Gibbon

Front Microbiol. 2014; 5: 785. Published online 2015 Jan 20. doi: 10.3389/fmicb.2014.00785

PMCID:: PMC4299520

Article PDF–8.7M

Select item 16797673.

Dynamic state of DNA topology is essential for genome condensation in bacteria

Ryosuke L Ohniwa, Kazuya Morikawa, Joongbaek Kim, Toshiko Ohta, Akira Ishihama, Chieko Wada, Kunio Takeyasu

EMBO J. 2006 Nov 29; 25(23): 5591–5602. Published online 2006 Nov 9. doi: 10.1038/sj.emboj.7601414

PMCID:: PMC1679767

Article PDF–603K

Select item 5515664.

Prokaryotic phylogenies inferred from protein structural domains

Eric J. Deeds, Hooman Hennessey, Eugene I. Shakhnovich

Genome Res. 2005 Mar; 15(3): 393–402. doi: 10.1101/gr.3033805

PMCID:: PMC551566

Article PDF–252K

Select item 79381225.

Information theoretic perspective on genome clustering

Alaguraj Veluchamy, Preeti Mehta, K.V. Srividhya, Hirendra Vikram, M.K. Govind, Ramneek Gupta, Abdul Aziz Bin Dukhyil, Raed Abdullah Alharbi, Saleh Abdullah Aloyuni, Mohamed M. Hassan, S. Krishnaswamy

Saudi J Biol Sci. 2021 Mar; 28(3): 1867–1889. Published online 2020 Dec 31. doi: 10.1016/j.sjbs.2020.12.039

PMCID:: PMC7938122

Article PDF–1.5M

Select item 34222176.

Meta-Analysis of General Bacterial Subclades in Whole-Genome Phylogenies Using Tree Topology Profiling

Thomas Meinel, Antje Krause

Evol Bioinform Online. 2012; 8: 489–525. Published online 2012 Aug 7. doi: 10.4137/EBO.S9642

PMCID:: PMC3422217

Article PDF–1.3M

Select item 27981587.

Assessing the Quality of Whole Genome Alignments in Bacteria

Firas Swidan, Ron Shamir

Adv Bioinformatics. 2009; 2009: 749027. Published online 2009 Nov 15. doi: 10.1155/2009/749027

PMCID:: PMC2798158

Article PDF–608K

Select item 18523168.

Transcriptional regulatory network discovery via multiple method integration: application to e. coli K12

Jingjun Sun, Kagan Tuncay, Alaa Abi Haidar, Lisa Ensman, Frank Stanley, Michael Trelinski, Peter Ortoleva

Algorithms Mol Biol. 2007; 2: 2. Published online 2007 Mar 30. doi: 10.1186/1748-7188-2-2

PMCID:: PMC1852316

Article PDF–707K

Select item 3878639.

A Comparative Genome Analysis Identifies Distinct Sorting Pathways in Gram-Positive Bacteria

David Comfort, Robert T. Clubb

Infect Immun. 2004 May; 72(5): 2710–2722. doi: 10.1128/IAI.72.5.2710-2722.2004

PMCID:: PMC387863

Article PDF–757K

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