PREDICTED: Oryzias latipes cyclic AMP-dependent transcription factor A - Nucleotide

Run BLAST
Find regions of similarity between this sequence and other sequences using BLAST.
Pick Primers
Design and test primers for this sequence using Primer-BLAST.
Highlight Sequence Features
Opens the Highlight Feature Bar and highlights feature annotations from the FEATURES table of the record. The Highlight Feature Bar can be used to navigate to and highlight other features and provides links to display the highlighted region separately. Links in the FEATURES table will also highlight the corresponding region of the sequence. More...
Find in this Sequence
Finds sub-sequences or patterns in the sequence and highlights the matching regions. The tool works with standard single letter nucleotide or protein codes including ambiguities and can match Prosite patterns in protein sequences. More...
Show in Genome Data Viewer
Opens the Genome Data Viewer, NCBI's genome browser, at the genomic location at which this sequence is annotated. View this sequence in the context of other features annotated at the same location and browse to other genome regions.

TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. [Bioinformatics. 2019]
TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations.
Tang H, Finn RD, Thomas PD. Bioinformatics. 2019 Feb 1; 35(3):518-520.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. [BMC Genomics. 2016]
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, et al. BMC Genomics. 2016 May 18; 17:368. Epub 2016 May 18.
Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. [Database (Oxford). 2012]
Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation.
Burge S, Kelly E, Lonsdale D, Mutowo-Muellenet P, McAnulla C, Mitchell A, Sangrador-Vegas A, Yong SY, Mulder N, Hunter S. Database (Oxford). 2012; 2012:bar068. Epub 2012 Feb 1.

RefSeq alternative splicing
See the other reference mRNA sequence splice variant for the atf1 gene (XM_020701471.2).
RefSeq protein product
See the reference protein sequence for cyclic AMP-dependent transcription factor ATF-1 (XP_004086159.1).

BioProject
Related BioProject entry
Protein
Protein sequence from Nucleotide coding region
Taxonomy
Taxonomy sequences associated with Nucleotide record
Annotated Genomic
Genomic sequence records that have the current RNA records as annotated features marking the exons of genes.
Functional Class
Functional class of the sequence domain architecture
Gene
Link to related Genes
PubMed (RefSeq)
Link to RefSeq PubMed articles
PubMed (Weighted)
Links to pubmed

GenScript latest version of gene cDNA ORF Clone [GenScript latest version of g...]
GenScript latest version of gene cDNA ORF Clone

PREDICTED: Oryzias latipes cyclic AMP-dependent transcription factor ATF-1 (LOC1...
PREDICTED: Oryzias latipes cyclic AMP-dependent transcription factor ATF-1 (LOC101174084), transcript variant X1, mRNA
gi|1343949299|ref|XM_004086111.4|

Nucleotide
RecName: Full=Ranatuerin-2
RecName: Full=Ranatuerin-2
gi|41017605|sp|P82742.1|RN2X2_AQUCT

Protein
zbtb33 zinc finger and BTB domain containing 33 [Xenopus tropicalis]
zbtb33 zinc finger and BTB domain containing 33 [Xenopus tropicalis]
Gene ID:100490577

Gene
LOC100286851 [Zea mays]
LOC100286851 [Zea mays]
Gene ID:100286851

Gene
LOC103644399 [Zea mays]
LOC103644399 [Zea mays]
Gene ID:103644399

Gene

Your browsing activity is empty.

Activity recording is turned off.

Nucleotide