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| Status |
Public on Apr 01, 2016 |
| Title |
Pho and Ph, H3K27me3 and Engrailed ChIP-seq data in Drosophila third instar larval brains and disks |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Genome-wide binding profile of PcG proteins Pho and Ph, H3K27me3 and Engrailed in Drosophila third instar larval brains and disks, in duplicate, using Illumina HiSeq 2500. The sequence reads that passed quality filters were analyzed.
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| |
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| Overall design |
Drosophila third instar larval brains and disks were dissected and fixed with 2% HCHO before sonication. After sonication, chromatin immunoprecipitation using anti-Pho, -Ph, -H3K27me3, and -Engrailed antibodies was carried out.
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| |
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| Contributor(s) |
De S, Kassis J, Smith H |
| Citation(s) |
27001825, 27146892, 27466807 |
| |
| Submission date |
Jan 14, 2016 |
| Last update date |
Aug 13, 2019 |
| Contact name |
sandip de |
| E-mail(s) |
des22@mail.nih.gov
|
| Organization name |
NICHD/NIH
|
| Department |
rm 3B-331, bldg 6B
|
| Lab |
Dr. Judith Kassis Lab
|
| Street address |
6 center drive
|
| City |
North Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL17275 |
Illumina HiSeq 2500 (Drosophila melanogaster) |
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| Samples (11)
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| This SubSeries is part of SuperSeries: |
| GSE77342 |
4C-seq data and Pho and Ph, H3K27me3 and Engrailed ChIP-seq data in wildtype and PRE-deleted third instar Drosophila larval brains and disks |
|
| Relations |
| BioProject |
PRJNA308863 |
| SRA |
SRP068481 |
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