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Series GSE61050 Query DataSets for GSE61050
Status Public on Sep 03, 2014
Title Expression data of neural progenitor cells differentiation from human embryonic stem cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Mocetinostat (MGCD) which is a kind of histone deacetylase inhibitors (HDACi) promotes human embryonic stem cells (hESCs) differentiation towards neural progenitor cells (NPCs). Application of HDAC inhibitors (HDACi) increased the expression of neuroectodermal markers once neural differentiation was initiated, thereby leading to more NPC generation.
We used microarrays to detail the global gene expression during NPC differentiaton upon MGCD treatment and identified the transcript changes effected by MGCD during this process.
 
Overall design Undifferentiated H9 hESCs (D0), as well as H9 cells with or without MGCD treatment on day 3 (D3C and D3M) and on day 7(D7C and D7M) of NPC generation were collected for RNA extraction and hybridization on Affymetrix microarrays.
 
Contributor(s) Le W, Yang J, Tang Y
Citation(s) 25406762
Submission date Sep 03, 2014
Last update date Mar 25, 2019
Contact name Weidong Le
E-mail(s) wdle@sibs.ac.cn
Organization name Institute of Health Sciences
Street address #197 Ruijin No.2 Road
City Shanghai
ZIP/Postal code 200025
Country China
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (5)
GSM1495964 BH13707-2_1D0
GSM1495965 BH13707-2_2D3C
GSM1495966 BH13707-2_5D3M
Relations
BioProject PRJNA260157

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61050_RAW.tar 26.7 Mb (http)(custom) TAR (of CEL, CHP)
GSE61050_differential_genes.xls.gz 12.9 Mb (ftp)(http) XLS
Processed data included within Sample table
Processed data provided as supplementary file
Processed data are available on Series record

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