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Series GSE69594 Query DataSets for GSE69594
Status Public on Mar 07, 2016
Title SOX2 O-GlcNAcylation alters its protein-protein interactions and genomic occupancy to modulate gene expression in pluripotent cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 26949256
Submission date Jun 04, 2015
Last update date May 15, 2019
Contact name Barbara Panning
E-mail(s) barbara.panning@gmail.com
Phone 415-514-0884
Organization name University of California, San Francisco
Department Biochemistry and Molecular biology
Lab Panning Lab
Street address 600, 16TH STREET, S374 - Genentech Hall,
City San Francisco
State/province CALIFORNIA
ZIP/Postal code 94158
Country USA
 
Platforms (2)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL20290 Agilent-034068/ArrayStar Mouse LncRNA microarray V2.0 (8x60K) [coding transcripts]
Samples (16)
GSM1704272 R1a_fSOX2_long
GSM1704273 R1b_fSox2_long
GSM1704274 R2a_fSox2_short
This SuperSeries is composed of the following SubSeries:
GSE69592 SOX2 O-GlcNAcylation alters its protein-protein interactions and genomic occupancy to modulate gene expression in pluripotent cells[ChIP-seq]
GSE69593 SOX2 O-GlcNAcylation alters its protein-protein interactions and genomic occupancy to modulate gene expression in pluripotent cells [array]
Relations
BioProject PRJNA285922

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69594_RAW.tar 3.0 Gb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp

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