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NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (Microbulbifer degradans 2-40; Microbulbifer sp. 2-40; Saccharophagus degradans ATCC 43961; Saccharophagus degradans str. 2-40; Saccharophagus degradans strain 2-40; bacterium 2-40). [ Saccharophagus degradans 2-40 ]

Gene ID: 3974157, updated on 25-Jan-2023

Summary

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Gene symbol
NEWENTRY
Gene description
Record to support submission of GeneRIFs for a gene not in Gene (Microbulbifer degradans 2-40; Microbulbifer sp. 2-40; Saccharophagus degradans ATCC 43961; Saccharophagus degradans str. 2-40; Saccharophagus degradans strain 2-40; bacterium 2-40).
Gene type
other
Organism
Saccharophagus degradans 2-40
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Cellvibrionaceae; Saccharophagus
Also known as
NEWENTRY
NEW
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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Presented are several crystal structures of Alg17c, a PL17 family alginate lyase, along with structure-function characterization of active site residues that are suggested to be involved in the exolytic mechanism of alginate depolymerization. [Algc]
    Title: Structure of a PL17 family alginate lyase demonstrates functional similarities among exotype depolymerases.
  2. The recombinant Alg17C was found to preferentially act on oligoalginates with degrees of polymerization higher than 2 to produce the alginate monomer, 4-deoxy-L: -erythro-5-hexoseulose uronic acid.[Alg17C]
    Title: Depolymerization of alginate into a monomeric sugar acid using Alg17C, an exo-oligoalginate lyase cloned from Saccharophagus degradans 2-40.
  3. We present soluble overexpression and molecular characterization of Aga50D. It had unique exo-lytic activity and was able to produce neoagarobiose directly from agarose. [Aga50D]
    Title: Overexpression and molecular characterization of Aga50D from Saccharophagus degradans 2-40: an exo-type beta-agarase producing neoagarobiose.
  4. Cel5G, Cel5H, and Cel5J were identified as processive endoglucanases acting on the beta-1,4 bonds linking cellobiose units in cellulose degradation. [Cel5G, Cel5H, Cel5J]
    Title: Processive endoglucanases mediate degradation of cellulose by Saccharophagus degradans.
Submit: New GeneRIF Correction