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    scpl4 serine carboxypeptidase-like 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843665, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl4
    Official Full Name
    serine carboxypeptidase-like 4
    Primary source
    TAIR:AT1G73310
    Locus tag
    AT1G73310
    See related
    Araport:AT1G73310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    serine carboxypeptidase-like 4; T18K17.2; T18K17_2
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    Genomic context

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    See scpl4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (27562441..27565177, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene serine carboxypeptidase-like 3 Neighboring gene serine carboxypeptidase-like 5 Neighboring gene serine carboxypeptidase-like 2 Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Kunitz family trypsin and protease inhibitor protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 4
    NP_177474.1
    • serine carboxypeptidase-like 4 (scpl4); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 3 (TAIR:AT1G73280.1); Has 3964 Blast hits to 3850 proteins in 442 species: Archae - 0; Bacteria - 468; Metazoa - 642; Fungi - 843; Plants - 1592; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27562441..27565177 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334584.1 → NP_001322854.1  serine carboxypeptidase-like 4 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AVE3, A0A5S9WTZ1

    2. NM_105990.2 → NP_177474.1  serine carboxypeptidase-like 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177474.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CAU4
      UniProtKB/TrEMBL
      A0A5S9WTZ1
      Conserved Domains (1) summary
      cl08270
      Location:25 → 441
      Peptidase_S10; Serine carboxypeptidase

    3. NM_001334585.1 → NP_001322853.1  serine carboxypeptidase-like 4 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AVA6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CAU4.1

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