GTE3 global transcription factor group E3 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: GTE3
Official Full Name: global transcription factor group E3
Primary source: TAIR:AT1G73150
Locus tag: AT1G73150
See related: Araport:AT1G73150
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F3N23.35; F3N23_35; global transcription factor group E3
Summary: Bromodomain and extra terminal domain family protein. Binds to acetyl-histone H3. Binding is reduced when GTE3 is SUMOylated by SIZ1.
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Genomic context

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See GTE3 in Genome Data Viewer

Location:: chromosome: 1

Exon count:: 4

Sequence:: Chromosome: 1; NC_003070.9 (27503973..27506406, complement)

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001334569.1

Supported by ESTs:

NM_105973.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables histone binding	IDA Inferred from Direct Assay more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: global transcription factor group E3

NP_177458.1

global transcription factor group E3 (GTE3); FUNCTIONS IN: histone binding, DNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1); Has 5728 Blast hits to 4631 proteins in 254 species: Archae - 0; Bacteria - 6; Metazoa - 3450; Fungi - 928; Plants - 599; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003070.9 Reference assembly

Range

27503973..27506406 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_105973.4 → NP_177458.1 global transcription factor group E3 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_177458.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q0WSA6, Q9S7T1

UniProtKB/TrEMBL

A0A178W401, A0A5S9WTX4, A0A654ENK8

Conserved Domains (2) summary

cd05506
Location:120 → 217

Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...

pfam17035
Location:308 → 370

BET; Bromodomain extra-terminal - transcription regulation
NM_001334569.1 → NP_001320310.1 global transcription factor group E3 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8AMI1, A0A654ENK8