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    ARV1 ARV1 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839569, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARV1
    Official Full Name
    ARV1 family protein
    Primary source
    TAIR:AT1G01020
    Locus tag
    AT1G01020
    See related
    Araport:AT1G01020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T25K16.2; T25K16_2
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    Genomic context

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    See ARV1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (6788..9130, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene NAC domain containing protein 1 Neighboring gene ncRNA Neighboring gene AP2/B3-like transcriptional factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis thaliana expresses two functional isoforms of Arvp, a protein involved in the regulation of cellular lipid homeostasis. Forés O, et al. Biochim Biophys Acta, 2006 Jul. PMID 16725371
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. involved in the regulation of cellular lipid homeostasis
      Title: Arabidopsis thaliana expresses two functional isoforms of Arvp, a protein involved in the regulation of cellular lipid homeostasis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001035846.2
    NM_001331239.1
    NM_001331240.1
    NM_001331243.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular sterol transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within sphingolipid metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within sterol metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ARV1 family protein
    NP_001030923.1
    • ARV1; CONTAINS InterPro DOMAIN/s: Arv1-like protein (InterPro:IPR007290); BEST Arabidopsis thaliana protein match is: Arv1-like protein (TAIR:AT4G01510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001318899.1
    • ARV1; CONTAINS InterPro DOMAIN/s: Arv1-like protein (InterPro:IPR007290); BEST Arabidopsis thaliana protein match is: Arv1-like protein (TAIR:AT4G01510.1); Has 311 Blast hits to 311 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 115; Plants - 42; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6788..9130 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331242.1 → NP_001321776.1  ARV1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0WRA1
      Conserved Domains (1) summary
      cl21705
      Location:1 → 146
      Arv1; Arv1-like family

    2. NM_001331241.1 → NP_001321777.1  ARV1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AS22
      Conserved Domains (1) summary
      cl21705
      Location:40 → 184
      Arv1; Arv1-like family

    3. NM_001331239.1 → NP_001318899.1  ARV1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WRA1, Q5MK24, Q9MAN2
      UniProtKB/TrEMBL
      A0A5S9RZJ7, A0A654E720
      Conserved Domains (1) summary
      pfam04161
      Location:7 → 193
      Arv1; Arv1-like family

    4. NM_001331240.1 → NP_001321775.1  ARV1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AS22
      Conserved Domains (1) summary
      cl21705
      Location:40 → 184
      Arv1; Arv1-like family

    5. NM_001331243.1 → NP_001321778.1  ARV1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARY9

    6. NM_001035846.2 → NP_001030923.1  ARV1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030923.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HQG4
      Conserved Domains (1) summary
      pfam04161
      Location:7 → 170
      Arv1; Arv1-like family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5MK24.1

    Gene LinkOut

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