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    YUC5 Flavin-binding monooxygenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834411, updated on 18-Sep-2024

    Summary

    Official Symbol
    YUC5
    Official Full Name
    Flavin-binding monooxygenase family protein
    Primary source
    TAIR:AT5G43890
    Locus tag
    AT5G43890
    See related
    Araport:AT5G43890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6B6.3; F6B6_3; SUPER1; SUPPRESSOR OF ER 1; YUCCA5
    Summary
    Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype
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    Genomic context

    See YUC5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (17648576..17650375, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene auxin canalization protein (DUF828) Neighboring gene chlorophyllase 2 Neighboring gene methyl-coenzyme M reductase II subunit gamma, putative (DUF3741) Neighboring gene myosin 2 Neighboring gene pfkB-like carbohydrate kinase family protein Neighboring gene transducin family protein / WD-40 repeat family protein

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables N,N-dimethylaniline monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables indole-3-pyruvate monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables monooxygenase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in auxin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within auxin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within response to ethylene IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    Flavin-binding monooxygenase family protein
    NP_199202.1
    • YUCCA5 (YUC5); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 9 (TAIR:AT1G04180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17648576..17650375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123756.2NP_199202.1  Flavin-binding monooxygenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199202.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LKC0
      UniProtKB/TrEMBL
      A0A178UK83, A0A5S9YAN8
      Conserved Domains (1) summary
      COG2072
      Location:26393
      CzcO; Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism]