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    MEE44 Nucleotidyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828214, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MEE44
    Official Full Name
    Nucleotidyltransferase family protein
    Primary source
    TAIR:AT4G00060
    Locus tag
    AT4G00060
    See related
    Araport:AT4G00060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6N15.10; F6N15_10; maternal effect embryo arrest 44
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    Genomic context

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    See MEE44 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    18
    Sequence:
    Chromosome: 4; NC_003075.7 (21351..29064)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Chalcone and stilbene synthase family protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
    2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001340228.1
    NM_001340229.1
    NM_001340230.1
    NM_116223.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables poly(A) RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleotidyltransferase family protein
    NP_191917.3
    • maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      21351..29064
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116223.4 → NP_191917.3  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191917.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXB2, F4JH01
      Conserved Domains (1) summary
      COG5260
      Location:1113 → 1478
      TRF4; DNA polymerase sigma [Replication, recombination and repair]

    2. NM_001340228.1 → NP_001328570.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B522

    3. NM_001340229.1 → NP_001328569.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXB2, F4JH01
      Conserved Domains (1) summary
      COG5260
      Location:1113 → 1478
      TRF4; DNA polymerase sigma [Replication, recombination and repair]

    4. NM_001340230.1 → NP_001328568.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXB2, F4JH01
      Conserved Domains (1) summary
      COG5260
      Location:1113 → 1478
      TRF4; DNA polymerase sigma [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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