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    CYP71A25 cytochrome P450, family 71, subfamily A, polypeptide 25 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823986, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP71A25
    Official Full Name
    cytochrome P450, family 71, subfamily A, polypeptide 25
    Primary source
    TAIR:AT3G48280
    Locus tag
    AT3G48280
    See related
    Araport:AT3G48280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 71; polypeptide 25; polypeptide 25''; subfamily A; T29H11.200
    Summary
    putative cytochrome P450
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    Genomic context

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    See CYP71A25 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (17879542..17881388)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene with no lysine (K) kinase 3 Neighboring gene cytochrome P450, family 71, subfamily A, polypeptide 26 Neighboring gene cytochrome P450, family 71, subfamily A, polypeptide 24 Neighboring gene uncharacterized protein Neighboring gene cytochrome P450, family 71, subfamily A, polypeptide 23

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
    2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
    4. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_148854.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi cis cisterna HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450, family 71, subfamily A, polypeptide 25
    NP_680107.1
    • ''cytochrome P450, family 71, subfamily A, polypeptide 25'' (CYP71A25); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 32582 Blast hits to 32347 proteins in 1656 species: Archae - 46; Bacteria - 3283; Metazoa - 11769; Fungi - 6829; Plants - 9594; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      17879542..17881388
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_148854.3 → NP_680107.1  cytochrome P450, family 71, subfamily A, polypeptide 25 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_680107.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9STK8
      UniProtKB/TrEMBL
      A0A178V621, A0A5S9XIW7
      Conserved Domains (1) summary
      cd11072
      Location:60 → 481
      CYP71-like; cytochrome P450 family 71 and similar cytochrome P450s
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9STK8.1

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