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    CAX9 cation exchanger 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820622, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CAX9
    Official Full Name
    cation exchanger 9
    Primary source
    TAIR:AT3G14070
    Locus tag
    AT3G14070
    See related
    Araport:AT3G14070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCCX3; CATION CALCIUM EXCHANGER 3; cation exchanger 9; CCX3; MAG2.9
    Summary
    Involved in cation (K, Na and Mn) homeostasis and transport
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    Genomic context

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    See CAX9 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (4660944..4663363, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RELA/SPOT homolog 2 Neighboring gene uncharacterized protein Neighboring gene Subtilase family protein Neighboring gene Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 Neighboring gene Small nuclear ribonucleoprotein family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtCCX3 is an Arabidopsis endomembrane H+ -dependent K+ transporter. Morris J, et al. Plant Physiol, 2008 Nov. PMID 18775974, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables manganese ion transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables monoatomic cation transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables monoatomic cation transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables potassium ion transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables sodium ion transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular monoatomic cation homeostasis IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cation stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic vesicle membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in endomembrane system IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in vacuolar membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cation exchanger 9
    NP_566474.1
    • cation exchanger 9 (CAX9); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 3863 Blast hits to 3216 proteins in 856 species: Archae - 67; Bacteria - 789; Metazoa - 1939; Fungi - 299; Plants - 225; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4660944..4663363 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112262.2 → NP_566474.1  cation exchanger 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566474.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LJI2
      UniProtKB/TrEMBL
      A0A5S9XBY7, A0A7G2EKS5
      Conserved Domains (1) summary
      PLN03151
      Location:1 → 643
      PLN03151; cation/calcium exchanger; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LJI2.1

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