U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SCPL15 serine carboxypeptidase-like 15 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820404, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SCPL15
    Official Full Name
    serine carboxypeptidase-like 15
    Primary source
    TAIR:AT3G12240
    Locus tag
    AT3G12240
    See related
    Araport:AT3G12240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    serine carboxypeptidase-like 15
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SCPL15 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Sequence:
    Chromosome: 3; NC_003074.8 (3902254..3904992, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DNA binding protein Neighboring gene serine carboxypeptidase-like 16 Neighboring gene serine carboxypeptidase-like 14 Neighboring gene TGACG motif-binding factor 6 Neighboring gene ncRNA Neighboring gene LYR family of Fe/S cluster biogenesis protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    serine carboxypeptidase-like 15
    NP_187832.2
    • serine carboxypeptidase-like 15 (SCPL15); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 14 (TAIR:AT3G12230.1); Has 3798 Blast hits to 3708 proteins in 428 species: Archae - 0; Bacteria - 341; Metazoa - 625; Fungi - 840; Plants - 1569; Viruses - 0; Other Eukaryotes - 423 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3902254..3904992 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112060.3 → NP_187832.2  serine carboxypeptidase-like 15 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187832.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C7D2, Q9LHI2
      UniProtKB/TrEMBL
      A0A178VH05, A0A5S9XBF0, A0A654F6E9
      Conserved Domains (1) summary
      cl08270
      Location:20 → 436
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C7D2.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools