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    scpl22 serine carboxypeptidase-like 22 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816934, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl22
    Official Full Name
    serine carboxypeptidase-like 22
    Primary source
    TAIR:AT2G24000
    Locus tag
    AT2G24000
    See related
    Araport:AT2G24000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    serine carboxypeptidase-like 22; T29E15.20; T29E15_20
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    Genomic context

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    See scpl22 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (10209421..10214042)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene cyclic nucleotide-gated channel 6 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene early nodulin-like protein 11 Neighboring gene serine carboxypeptidase-like 23 Neighboring gene Putative BCR, YbaB family COG0718 Neighboring gene zinc ion binding / nucleic acid binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 22
    NP_001077950.1
    • serine carboxypeptidase-like 22 (scpl22); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G30610.1); Has 3944 Blast hits to 3014 proteins in 261 species: Archae - 0; Bacteria - 12; Metazoa - 725; Fungi - 882; Plants - 1918; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink).
    NP_179978.2
    • serine carboxypeptidase-like 22 (scpl22); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G30610.1); Has 3601 Blast hits to 3537 proteins in 344 species: Archae - 0; Bacteria - 138; Metazoa - 640; Fungi - 882; Plants - 1458; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10209421..10214042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127962.3 → NP_179978.2  serine carboxypeptidase-like 22 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179978.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82228, Q1PF08, Q1PF09
      UniProtKB/TrEMBL
      A0A5S9X0L5, A6XH04
      Conserved Domains (1) summary
      pfam00450
      Location:35 → 457
      Peptidase_S10; Serine carboxypeptidase

    2. NM_001084481.1 → NP_001077950.1  serine carboxypeptidase-like 22 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077950.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X0L5
      Conserved Domains (1) summary
      pfam00450
      Location:35 → 394
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1PF08.1

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