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    FIZ1 FLT3 interacting zinc finger 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 789631, updated on 4-Oct-2024

    Summary

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    Official Symbol
    FIZ1provided by VGNC
    Official Full Name
    FLT3 interacting zinc finger 1provided by VGNC
    Primary source
    VGNC:VGNC:52195
    See related
    BGD:BT21972; Ensembl:ENSBTAG00000030403
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See FIZ1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (61942552..61947503)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 784 Neighboring gene zinc finger protein 865 Neighboring gene zinc finger protein 524 Neighboring gene zinc finger protein 579 Neighboring gene SH3 domain binding kinase family member 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interaction of retinal bZIP transcription factor NRL with Flt3-interacting zinc-finger protein Fiz1: possible role of Fiz1 as a transcriptional repressor. Mitton KP, et al. Hum Mol Genet, 2003 Feb 15. PMID 12566383
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    flt3-interacting zinc finger protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101308.1 → NP_001094778.1  flt3-interacting zinc finger protein 1

      See identical proteins and their annotated locations for NP_001094778.1

      Status: PROVISIONAL

      Source sequence(s)
      BC149069
      UniProtKB/TrEMBL
      A6QNZ1
      Related
      ENSBTAP00000040533.2, ENSBTAT00000042929.3
      Conserved Domains (3) summary
      COG5048
      Location:57 → 114
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:421 → 441
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:433 → 458
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      61942552..61947503
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005219725.5 → XP_005219782.1  flt3-interacting zinc finger protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005219782.1

      UniProtKB/TrEMBL
      A0A3Q1LNA0
      Related
      ENSBTAP00000061441.2, ENSBTAT00000074588.2
      Conserved Domains (2) summary
      sd00017
      Location:461 → 481
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:473 → 498
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials