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    TMPRSS11BNL TMPRSS11B N terminal-like [ Bos taurus (domestic cattle) ]

    Gene ID: 785585, updated on 4-Oct-2024

    Summary

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    Gene symbol
    TMPRSS11BNL
    Gene description
    TMPRSS11B N terminal-like
    See related
    Ensembl:ENSBTAG00000048377
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

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    See TMPRSS11BNL in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (83890024..83911924, complement)

    Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene transmembrane protease serine 11G Neighboring gene transmembrane serine protease 11F Neighboring gene transmembrane protease serine 11B Neighboring gene nucleosome assembly protein 1-like 1 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protease serine 11B-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206871.1 → NP_001193800.1  transmembrane protease serine 11B-like protein

      See identical proteins and their annotated locations for NP_001193800.1

      Status: VALIDATED

      Source sequence(s)
      EV690549, EV744172, NKLS02000006
      UniProtKB/TrEMBL
      A0A3Q1MRJ0
      Related
      ENSBTAP00000072460.1, ENSBTAT00000078450.1
      Conserved Domains (2) summary
      smart00020
      Location:184 → 410
      Tryp_SPc; Trypsin-like serine protease
      pfam01390
      Location:46 → 150
      SEA; SEA domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      83890024..83911924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010806165.4 → XP_010804467.1  transmembrane protease serine 11B-like protein isoform X1

      Conserved Domains (3) summary
      smart00020
      Location:103 → 329
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:106 → 332
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam01390
      Location:1 → 59
      SEA; SEA domain
    Nucleotide Protein Strain
    Heading Accession and Version

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