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    LOC785287 ring finger protein, LIM domain interacting-like [ Bos taurus (domestic cattle) ]

    Gene ID: 785287, updated on 4-Oct-2024

    Summary

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    Gene symbol
    LOC785287
    Gene description
    ring finger protein, LIM domain interacting-like
    See related
    BGD:BT27266; Ensembl:ENSBTAG00000040357
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

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    See LOC785287 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (108854393..108858371, complement)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein uS2B-like Neighboring gene ferritin heavy chain Neighboring gene E3 ubiquitin-protein ligase RLIM-like Neighboring gene serine/arginine-rich splicing factor 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in random inactivation of X chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RLIM
    Names
    ring finger protein 12-like
    NP_001093198.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099728.2 → NP_001093198.1  E3 ubiquitin-protein ligase RLIM

      See identical proteins and their annotated locations for NP_001093198.1

      Status: PROVISIONAL

      Source sequence(s)
      BC142439
      UniProtKB/TrEMBL
      A5PKC6
      Related
      ENSBTAP00000052691.2, ENSBTAT00000055387.3
      Conserved Domains (1) summary
      pfam13639
      Location:580 → 621
      zf-RING_2; Ring finger domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      108854393..108858371 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials