DDX21 DExD-box helicase 21 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: DDX21provided by VGNC
Official Full Name: DExD-box helicase 21provided by VGNC
Primary source: VGNC:VGNC:97259
See related: BGD:BT11967; Ensembl:ENSBTAG00000014558
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 28

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	28	NC_037355.1 (25219711..25243113)

Chromosome 28 - NC_037355.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037355.1 Chromosome 28 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA helicase activity	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: nucleolar RNA helicase 2

Names: DEAD (Asp-Glu-Ala-Asp) box helicase 21; DEAD (Asp-Glu-Ala-Asp) box polypeptide 21; DEAD-box helicase 21

NP_001076996.1

EC 3.6.4.13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001083527.1 → NP_001076996.1 nucleolar RNA helicase 2

See identical proteins and their annotated locations for NP_001076996.1

Status: PROVISIONAL

Source sequence(s)

BC123648

UniProtKB/TrEMBL

A4FV23, F6QHI8

Related

ENSBTAP00000019351.5, ENSBTAT00000019351.5

Conserved Domains (5) summary

PRK04837
Location:183 → 589

PRK04837; ATP-dependent RNA helicase RhlB; Provisional

cd00079
Location:412 → 539

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd00268
Location:189 → 396

DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...

cd12936
Location:618 → 710

GUCT_RHII_Gualpha_beta; RNA-binding GUCT domain found in vertebrate RNA helicase II/Gualpha (RH-II/Gualpha), RNA helicase II/Gubeta (RH-II/Gubeta) and similar proteins

pfam05091
Location:718 → 775

eIF-3_zeta; Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)