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    ca13.2 carbonic anhydrase 13 gene 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 780246, updated on 17-Aug-2024

    Summary

    Official Symbol
    ca13.2provided by Xenbase
    Official Full Name
    carbonic anhydrase 13 gene 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-29208903
    See related
    Ensembl:ENSXETG00000013780
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    car1
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    Genomic context

    See ca13.2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (125185527..125201479)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (110266858..110284652)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101733048 Neighboring gene leucine rich repeat and coiled-coil centrosomal protein 1 Neighboring gene E2F transcription factor 5 Neighboring gene ribosomal biogenesis factor Neighboring gene carbonic anhydrase 13 gene 1 Neighboring gene carbonic anhydrase I

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    carbonic anhydrase 13 gene 2; carbonic anhydrase I
    Names
    car1_predicted
    NP_001072785.1
    XP_012820394.1
    XP_012820395.1
    XP_012820397.1
    XP_017950194.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079317.1NP_001072785.1  carbonic anhydrase 13 gene 2

      See identical proteins and their annotated locations for NP_001072785.1

      Status: PROVISIONAL

      Source sequence(s)
      BC118911
      UniProtKB/TrEMBL
      Q0VFA2
      Conserved Domains (1) summary
      cl00012
      Location:16247
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      125185527..125201479
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012964941.3XP_012820395.1  carbonic anhydrase I isoform X1

      See identical proteins and their annotated locations for XP_012820395.1

      UniProtKB/TrEMBL
      Q0VFA2
      Conserved Domains (1) summary
      cl00012
      Location:16247
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    2. XM_012964940.3XP_012820394.1  carbonic anhydrase I isoform X1

      See identical proteins and their annotated locations for XP_012820394.1

      UniProtKB/TrEMBL
      Q0VFA2
      Conserved Domains (1) summary
      cl00012
      Location:16247
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    3. XM_018094705.2XP_017950194.1  carbonic anhydrase I isoform X1

      UniProtKB/TrEMBL
      Q0VFA2
      Conserved Domains (1) summary
      cl00012
      Location:16247
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    4. XM_012964943.3XP_012820397.1  carbonic anhydrase I isoform X1

      See identical proteins and their annotated locations for XP_012820397.1

      UniProtKB/TrEMBL
      Q0VFA2
      Related
      ENSXETP00000030171.3, ENSXETT00000030171.5
      Conserved Domains (1) summary
      cl00012
      Location:16247
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...