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    spaca9 sperm acrosome associated 9 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 779836, updated on 17-Aug-2024

    Summary

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    Official Symbol
    spaca9provided by Xenbase
    Official Full Name
    sperm acrosome associated 9provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1012283
    See related
    Ensembl:ENSXETG00000006261
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    c9orf9
    Orthologs
    human mouse all
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    Genomic context

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    See spaca9 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (11438003..11446765, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (7096694..7104182)

    Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene growth factor independent 1B transcription repressor Neighboring gene TSC complex subunit 1 Neighboring gene adenylate kinase 8 Neighboring gene general transcription factor IIIC subunit 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC146830

    General protein information

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    Preferred Names
    sperm acrosome-associated protein 9
    Names
    Rsb66 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078914.2 → NP_001072382.2  sperm acrosome-associated protein 9

      Status: VALIDATED

      Source sequence(s)
      CX886707
      UniProtKB/TrEMBL
      A0A6I8PZA2, Q0V9K7
      Related
      ENSXETP00000059929.2, ENSXETT00000062508.3
      Conserved Domains (1) summary
      pfam15120
      Location:6 → 169
      SPACA9; Sperm acrosome-associated protein 9

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      11438003..11446765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031890542.1 → XP_031746402.1  sperm acrosome-associated protein 9 isoform X1

      UniProtKB/TrEMBL
      A0A6I8S7B4
      Conserved Domains (1) summary
      pfam15120
      Location:6 → 169
      SPACA9; Sperm acrosome-associated protein 9

    2. XM_012968609.3 → XP_012824063.1  sperm acrosome-associated protein 9 isoform X1

      UniProtKB/TrEMBL
      A0A6I8S7B4
      Related
      ENSXETP00000092687.1, ENSXETT00000101447.2
      Conserved Domains (1) summary
      pfam15120
      Location:6 → 169
      SPACA9; Sperm acrosome-associated protein 9
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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