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    tmem259 transmembrane protein 259 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 779707, updated on 18-Sep-2024

    Summary

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    Official Symbol
    tmem259provided by Xenbase
    Official Full Name
    transmembrane protein 259provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5753986
    See related
    Ensembl:ENSXETG00000021600
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    c19orf6
    Orthologs
    human mouse all
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    Genomic context

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    See tmem259 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (100355546..100377725)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (81413118..81435364)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene glutathione peroxidase 4 Neighboring gene strawberry notch homolog 2 Neighboring gene glutamate receptor, ionotropic, N-methyl-D-aspartate 3B Neighboring gene WD repeat domain 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC145031

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    membralin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078786.1 → NP_001072254.1  membralin

      See identical proteins and their annotated locations for NP_001072254.1

      Status: PROVISIONAL

      Source sequence(s)
      BC121219
      UniProtKB/TrEMBL
      F6XHS8, Q0VA72
      Related
      ENSXETP00000046683.5, ENSXETT00000046683.5
      Conserved Domains (1) summary
      pfam09746
      Location:26 → 391
      Membralin; tumor-associated protein

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      100355546..100377725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012965019.3 → XP_012820473.1  membralin isoform X1

      UniProtKB/TrEMBL
      A0A8J0SQA7
      Conserved Domains (1) summary
      pfam09746
      Location:26 → 391
      Membralin; Tumour-associated protein
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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