rps6ka1 ribosomal protein S6 kinase a, polypeptide 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rps6ka1provided by ZNC
Official Full Name: ribosomal protein S6 kinase a, polypeptide 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-060929-516
See related: Ensembl:ENSDARG00000033437 AllianceGenome:ZFIN:ZDB-GENE-060929-516
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: wu:fc56h07; zgc:152654
Summary: Predicted to enable ribosomal protein S6 kinase activity. Predicted to be involved in TORC1 signaling and positive regulation of DNA-templated transcription. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleoplasm. Orthologous to human RPS6KA1 (ribosomal protein S6 kinase A1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 17

Exon count:: 26

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (27064414..27171352)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (27143993..27151669)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables kinase activity	IEA Inferred from Electronic Annotation more info
enables protein kinase activity	IEA Inferred from Electronic Annotation more info
enables protein serine/threonine kinase activity	IEA Inferred from Electronic Annotation more info
enables transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within phosphorylation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein phosphorylation	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ribosomal protein S6 kinase alpha-1

NP_001071243.2

EC 2.7.11.1

XP_068070560.1

EC 2.7.11.1

XP_068070561.1

EC 2.7.11.1

XP_068070562.1

EC 2.7.11.1

XP_068070563.1

EC 2.7.11.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.