slc38a8 solute carrier family 38 member 8 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: slc38a8provided by Xenbase
Official Full Name: solute carrier family 38 member 8provided by Xenbase
Primary source: Xenbase:XB-GENE-5766974
See related: Ensembl:ENSXETG00000021709
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: snat8
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	4	NC_030680.2 (48317875..48343356, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	4	NC_030680.1 (50826429..50851979, complement)

Chromosome 4 - NC_030680.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables L-amino acid transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in amino acid transmembrane transport	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within amino acid transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within sodium ion transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: putative sodium-coupled neutral amino acid transporter 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001044435.1 → NP_001037900.1 putative sodium-coupled neutral amino acid transporter 8

See identical proteins and their annotated locations for NP_001037900.1

Status: PROVISIONAL

Source sequence(s)

CR760593

UniProtKB/Swiss-Prot

Q28I47

Conserved Domains (1) summary

cl00456
Location:29 → 434

SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

48317875..48343356 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_012961232.3 → XP_012816686.1 putative sodium-coupled neutral amino acid transporter 8 isoform X1

UniProtKB/TrEMBL

A0A6I8Q183

Conserved Domains (1) summary

cl00456
Location:37 → 442

SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
XM_018093079.2 → XP_017948568.1 putative sodium-coupled neutral amino acid transporter 8 isoform X2

UniProtKB/Swiss-Prot

Q28I47

Related

ENSXETP00000062754.3, ENSXETT00000066236.3

Conserved Domains (1) summary

cl00456
Location:29 → 434

SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain