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    ODC1 ornithine decarboxylase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695625, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ODC1provided by VGNC
    Official Full Name
    ornithine decarboxylase 1provided by VGNC
    Primary source
    VGNC:VGNC:75578
    See related
    Ensembl:ENSMMUG00000020441
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ODC1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (98312001..98320226)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (10440354..10448581, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein 10 Neighboring gene uncharacterized LOC114671773 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene hippocalcin like 1 Neighboring gene small nucleolar RNA SNORA51

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ornithine decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in putrescine biosynthetic process from ornithine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ornithine decarboxylase
    XP_014967125.2
    XP_014967126.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001198686.2 → NP_001185615.2  ornithine decarboxylase

      Status: VALIDATED

      Source sequence(s)
      QNVO02000093
      UniProtKB/TrEMBL
      F6W7N2, G7NBA0, H9EV40
      Related
      ENSMMUP00000026911.3, ENSMMUT00000028759.4
      Conserved Domains (1) summary
      cd00622
      Location:37 → 408
      PLPDE_III_ODC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      98312001..98320226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111640.2 → XP_014967126.2  ornithine decarboxylase isoform X1

      UniProtKB/TrEMBL
      F6W7N2, G7NBA0, H9EV40
      Related
      ENSMMUP00000062896.1, ENSMMUT00000091344.1
      Conserved Domains (1) summary
      cd00622
      Location:37 → 408
      PLPDE_III_ODC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase

    2. XM_015111639.2 → XP_014967125.2  ornithine decarboxylase isoform X1

      UniProtKB/TrEMBL
      F6W7N2, G7NBA0, H9EV40
      Conserved Domains (1) summary
      cd00622
      Location:37 → 408
      PLPDE_III_ODC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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