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    Fam131c family with sequence similarity 131, member C [ Rattus norvegicus (Norway rat) ]

    Gene ID: 690880, updated on 2-Nov-2024

    Summary

    Symbol
    Fam131cprovided by RGD
    Full Name
    family with sequence similarity 131, member Cprovided by RGD
    Primary source
    RGD:1590955
    See related
    AllianceGenome:RGD:1590955
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human FAM131C (family with sequence similarity 131 member C). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Heart (RPKM 50.7), Brain (RPKM 22.5) and 4 other tissues See more
    Orthologs
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    Genomic context

    See Fam131c in Genome Data Viewer
    Location:
    5q36
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (158957444..158973773)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (153674459..153690791)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (159914931..159931089)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene Eph receptor A2 Neighboring gene ribosomal protein S27a, pseudogene 2 Neighboring gene chloride voltage-gated channel Ka Neighboring gene chloride voltage-gated channel Kb

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    family with sequence similarity 131, member C; protein FAM131C
    Names
    protein FAM131C-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001431279.1NP_001418208.1  family with sequence similarity 131, member C

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      F1M473

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      158957444..158973773
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008764303.3XP_008762525.1  protein FAM131C

      Conserved Domains (1) summary
      pfam15010
      Location:78183
      FAM131; Putative cell signalling