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    Ces3a carboxylesterase 3a [ Rattus norvegicus (Norway rat) ]

    Gene ID: 689754, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Ces3aprovided by RGD
    Official Full Name
    carboxylesterase 3aprovided by RGD
    Primary source
    RGD:1588734
    See related
    AllianceGenome:RGD:1588734
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Ces3-ps1
    Summary
    Orthologous to human CES3 (carboxylesterase 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Kidney (RPKM 5.9), Liver (RPKM 2.3) and 1 other tissue See more
    Orthologs
    human mouse all
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    Genomic context

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    See Ces3a in Genome Data Viewer
    Location:
    19q11
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (49902312..49910484)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (32992386..33000562)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (37070705..37079411)

    Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene acylcarnitine hydrolase-like Neighboring gene carboxylesterase 2H Neighboring gene carboxylesterase 4A Neighboring gene small nucleolar RNA SNORA17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Recommended nomenclature for five mammalian carboxylesterase gene families: human, mouse, and rat genes and proteins. Holmes RS, et al. Mamm Genome, 2010 Oct. PMID 20931200, Free PMC Article
    2. Proteomic analysis of human parotid gland exosomes by multidimensional protein identification technology (MudPIT). Gonzalez-Begne M, et al. J Proteome Res, 2009 Mar. PMID 19199708, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: carboxylesterase 3; carboxylesterase 3, pseudogene 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086037.1 Reference GRCr8

      Range
      49902312..49910484
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039098134.2 → XP_038954062.1  LOW QUALITY PROTEIN: carboxylesterase 3

      Conserved Domains (1) summary
      pfam00135
      Location:35 → 540
      COesterase; Carboxylesterase family
    Nucleotide Protein Strain
    Heading Accession and Version

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