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    Aadacl2 arylacetamide deacetylase like 2 [ Mus musculus (house mouse) ]

    Gene ID: 639634, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Aadacl2provided by MGI
    Official Full Name
    arylacetamide deacetylase like 2provided by MGI
    Primary source
    MGI:MGI:3646333
    See related
    Ensembl:ENSMUSG00000091376 AllianceGenome:MGI:3646333
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG639634
    Summary
    Orthologous to human AADACL2 (arylacetamide deacetylase like 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Aadacl2 in Genome Data Viewer
    Location:
    3 D; 3 29.17 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (59914164..59932841)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (60006743..60025420)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene AADACL2 family member 1 Neighboring gene arylacetamide deacetylase-like 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_07773 Neighboring gene crumbs homolog 1 pseudogene Neighboring gene arylacetamide deacetylase Neighboring gene STARR-seq mESC enhancer starr_07774 Neighboring gene STARR-seq mESC enhancer starr_07775 Neighboring gene succinate receptor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Genetic determinants of micronucleus formation in vivo. Adams DJ, et al. Nature, 2024 Mar. PMID 38355793, Free PMC Article
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    arylacetamide deacetylase like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128091.1 → NP_001121563.1  arylacetamide deacetylase like 2 precursor

      See identical proteins and their annotated locations for NP_001121563.1

      Status: PROVISIONAL

      Source sequence(s)
      BC147728
      Consensus CDS
      CCDS50917.1
      UniProtKB/TrEMBL
      B2RWD2
      Related
      ENSMUSP00000129444.2, ENSMUST00000169794.2
      Conserved Domains (2) summary
      COG0657
      Location:75 → 372
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam07859
      Location:107 → 372
      Abhydrolase_3; alpha/beta hydrolase fold

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      59914164..59932841
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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