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    SUN2 Sad1 and UNC84 domain containing 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 618392, updated on 4-Oct-2024

    Summary

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    Official Symbol
    SUN2provided by VGNC
    Official Full Name
    Sad1 and UNC84 domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:35474
    See related
    Ensembl:ENSBTAG00000003693
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    UNC84B
    Orthologs
    human mouse all
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    Genomic context

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    See SUN2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (110358965..110377283, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene translocase of outer mitochondrial membrane 22 Neighboring gene Josephin domain containing 1 Neighboring gene GTP binding protein 1 Neighboring gene dynein axonemal light chain 4 Neighboring gene neuronal pentraxin receptor Neighboring gene chromobox 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC151713

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-membrane adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear envelope organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of meiotic nuclear membrane microtubule tethering complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SUN domain-containing protein 2
    Names
    unc-84 homolog B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001102319.1 → NP_001095789.1  SUN domain-containing protein 2

      See identical proteins and their annotated locations for NP_001095789.1

      Status: PROVISIONAL

      Source sequence(s)
      BC148095
      UniProtKB/TrEMBL
      A6QLV1, F6PTU3
      Conserved Domains (2) summary
      pfam07738
      Location:592 → 726
      Sad1_UNC; Sad1 / UNC-like C-terminal
      cl23720
      Location:338 → 447
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      110358965..110377283 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024992240.2 → XP_024848008.1  SUN domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      F6PTU3
      Conserved Domains (2) summary
      pfam07738
      Location:591 → 725
      Sad1_UNC; Sad1 / UNC-like C-terminal
      cl25732
      Location:280 → 562
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_024992239.2 → XP_024848007.1  SUN domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      F6PTU3
      Conserved Domains (2) summary
      pfam07738
      Location:590 → 724
      Sad1_UNC; Sad1 / UNC-like C-terminal
      cl25732
      Location:280 → 561
      SMC_N; RecF/RecN/SMC N terminal domain

    3. XM_024992238.2 → XP_024848006.1  SUN domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      F6PTU3
      Related
      ENSBTAP00000004813.6, ENSBTAT00000004813.7
      Conserved Domains (2) summary
      pfam07738
      Location:591 → 725
      Sad1_UNC; Sad1 / UNC-like C-terminal
      cl25732
      Location:280 → 562
      SMC_N; RecF/RecN/SMC N terminal domain

    4. XM_024992241.2 → XP_024848009.1  SUN domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      F6PTU3
      Conserved Domains (2) summary
      pfam07738
      Location:591 → 725
      Sad1_UNC; Sad1 / UNC-like C-terminal
      cl25732
      Location:280 → 562
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein Strain
    Heading Accession and Version

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