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    CLDND2 claudin domain containing 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 618259, updated on 4-Oct-2024

    Summary

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    Official Symbol
    CLDND2provided by VGNC
    Official Full Name
    claudin domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:52186
    See related
    BGD:BT20233; Ensembl:ENSBTAG00000020450
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CLDND2 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (57436427..57439787, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene V-set and immunoglobulin domain containing 10 like Neighboring gene electron transfer flavoprotein subunit beta Neighboring gene natural killer cell granule protein 7 Neighboring gene lens intrinsic membrane protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    claudin domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206293.1 → NP_001193222.1  claudin domain-containing protein 2

      See identical proteins and their annotated locations for NP_001193222.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000018
      UniProtKB/TrEMBL
      E1BNM0
      Related
      ENSBTAP00000027251.3, ENSBTAT00000027251.5
      Conserved Domains (1) summary
      cl21598
      Location:10 → 143
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      57436427..57439787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059876958.1 → XP_059732941.1  claudin domain-containing protein 2 isoform X6

      UniProtKB/TrEMBL
      E1BNM0

    2. XM_059876955.1 → XP_059732938.1  claudin domain-containing protein 2 isoform X3

    3. XM_059876957.1 → XP_059732940.1  claudin domain-containing protein 2 isoform X5

    4. XM_059876954.1 → XP_059732937.1  claudin domain-containing protein 2 isoform X2

    5. XM_059876956.1 → XP_059732939.1  claudin domain-containing protein 2 isoform X4

    6. XM_059876953.1 → XP_059732936.1  claudin domain-containing protein 2 isoform X1

    7. XM_059876960.1 → XP_059732943.1  claudin domain-containing protein 2 isoform X8

    8. XM_059876959.1 → XP_059732942.1  claudin domain-containing protein 2 isoform X7

    9. XM_024978557.2 → XP_024834325.1  claudin domain-containing protein 2 isoform X6

      UniProtKB/TrEMBL
      E1BNM0
      Conserved Domains (1) summary
      cl21598
      Location:10 → 143
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    10. XM_024978556.2 → XP_024834324.1  claudin domain-containing protein 2 isoform X3

      Conserved Domains (1) summary
      cl21598
      Location:10 → 143
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
    Nucleotide Protein Strain
    Heading Accession and Version

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