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    SCN1B sodium voltage-gated channel beta subunit 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 618204, updated on 10-Oct-2024

    Summary

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    Official Symbol
    SCN1Bprovided by VGNC
    Official Full Name
    sodium voltage-gated channel beta subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:34346
    See related
    Ensembl:ENSBTAG00000003826
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SCN1B in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (45771487..45781391)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene calmodulin pseudogene Neighboring gene GRAM domain containing 1A Neighboring gene hepsin Neighboring gene FXYD domain containing ion transport regulator 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sodium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cardiac muscle cell action potential involved in contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of heart rate by cardiac conduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of voltage-gated sodium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium channel subunit beta-1
    Names
    sodium channel, voltage-gated, type I, beta subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076496.1 → NP_001069964.1  sodium channel subunit beta-1 precursor

      See identical proteins and their annotated locations for NP_001069964.1

      Status: PROVISIONAL

      Source sequence(s)
      BC118258
      UniProtKB/Swiss-Prot
      Q17QN4
      UniProtKB/TrEMBL
      A0AAA9S9M7
      Related
      ENSBTAP00000080632.1, ENSBTAT00000133484.1
      Conserved Domains (1) summary
      pfam07686
      Location:23 → 147
      V-set; Immunoglobulin V-set domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      45771487..45781391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015458075.3 → XP_015313561.1  sodium channel subunit beta-1 isoform X2

      Conserved Domains (1) summary
      pfam07686
      Location:33 → 157
      V-set; Immunoglobulin V-set domain

    2. XM_059876952.1 → XP_059732935.1  sodium channel subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9T919
      Related
      ENSBTAP00000092389.1, ENSBTAT00000107438.1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q17QN4.1 GenPept UniProtKB/Swiss-Prot:Q17QN4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.