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    RAB27A RAB27A, member RAS oncogene family [ Bos taurus (domestic cattle) ]

    Gene ID: 618035, updated on 10-Oct-2024

    Summary

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    Gene symbol
    RAB27A
    Gene description
    RAB27A, member RAS oncogene family
    See related
    BGD:BT20614; Ensembl:ENSBTAG00000012408
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RAB27A in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (54999005..55094845)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene cell cycle progression 1 Neighboring gene microRNA mir-628 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class B Neighboring gene uncharacterized LOC788201 Neighboring gene uncharacterized LOC132342125 Neighboring gene ribosomal L24 domain containing 1 Neighboring gene uncharacterized LOC132346374

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in melanosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in melanosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in secretory granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-27A
    NP_001094740.1
    XP_024853626.1
    XP_024853628.1
    XP_059746654.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101270.1 → NP_001094740.1  ras-related protein Rab-27A

      See identical proteins and their annotated locations for NP_001094740.1

      Status: PROVISIONAL

      Source sequence(s)
      BC147901
      UniProtKB/TrEMBL
      A6QLB1, G3MYK6
      Related
      ENSBTAP00000016464.5, ENSBTAT00000016464.6
      Conserved Domains (1) summary
      cd04127
      Location:6 → 185
      Rab27A; Rab GTPase family 27a (Rab27a)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      54999005..55094845
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059890671.1 → XP_059746654.1  ras-related protein Rab-27A isoform X1

      UniProtKB/TrEMBL
      A6QLB1

    2. XM_024997860.2 → XP_024853628.1  ras-related protein Rab-27A isoform X1

      UniProtKB/TrEMBL
      A6QLB1, G3MYK6
      Conserved Domains (1) summary
      cd04127
      Location:6 → 185
      Rab27A; Rab GTPase family 27a (Rab27a)

    3. XM_024997858.2 → XP_024853626.1  ras-related protein Rab-27A isoform X1

      UniProtKB/TrEMBL
      A6QLB1, G3MYK6
      Conserved Domains (1) summary
      cd04127
      Location:6 → 185
      Rab27A; Rab GTPase family 27a (Rab27a)
    Nucleotide Protein Strain
    Heading Accession and Version

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