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    TRAPPC1 trafficking protein particle complex subunit 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 616205, updated on 4-Oct-2024

    Summary

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    Official Symbol
    TRAPPC1provided by VGNC
    Official Full Name
    trafficking protein particle complex subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:36284
    See related
    Ensembl:ENSBTAG00000047214
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TRAPPC1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (27610784..27612328, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 227 Neighboring gene chromodomain helicase DNA binding protein 3 Neighboring gene small Cajal body-specific RNA 21 Neighboring gene potassium voltage-gated channel subfamily A regulatory beta subunit 3 Neighboring gene centrobin, centriole duplication and spindle assembly protein Neighboring gene uncharacterized LOC101902972 Neighboring gene guanylate cyclase 2D, retinal

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Clone Names

    • MGC140540

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking protein particle complex subunit 1
    Names
    trafficking protein particle complex 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076413.2 → NP_001069881.1  trafficking protein particle complex subunit 1

      See identical proteins and their annotated locations for NP_001069881.1

      Status: PROVISIONAL

      Source sequence(s)
      BC118345
      UniProtKB/Swiss-Prot
      Q17QI1
      Related
      ENSBTAP00000055462.1, ENSBTAT00000065281.3
      Conserved Domains (1) summary
      cd14855
      Location:4 → 133
      TRAPPC1_MUM2; Trafficking protein particle complex subunit 1

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      27610784..27612328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005220395.5 → XP_005220452.1  trafficking protein particle complex subunit 1 isoform X1

      See identical proteins and their annotated locations for XP_005220452.1

      UniProtKB/Swiss-Prot
      Q17QI1
      Conserved Domains (1) summary
      cd14855
      Location:4 → 133
      TRAPPC1_MUM2; Trafficking protein particle complex subunit 1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q17QI1.1 GenPept UniProtKB/Swiss-Prot:Q17QI1

    Gene LinkOut

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